RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MFSD7Q6UXD7 560 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 NPNTQ6UXI9 565 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 MARK2Q7KZI7 788 aaKnown RBP15.68■□□□□ 0.1
VRK3-221ENST00000600284 TMPRSS9Q7Z410 1059 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 TRIM74Q86UV6 250 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 AGAP3Q96P47 875 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 CPNE5Q9HCH3 593 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 NFKBIL1Q9UBC1 381 aaPredicted RBP15.68■□□□□ 0.1
VRK3-221ENST00000600284 ZNHIT2Q9UHR6 403 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 PLEKHM1Q9Y4G2 1056 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 ALG6Q9Y672 507 aa15.68■□□□□ 0.1
VRK3-221ENST00000600284 GPR89AB7ZAQ6 455 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 K7ENP7 123 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 MTSS1O43312 755 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 GPR89BP0CG08 455 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 HGFP14210 728 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 CD1CP29017 333 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 DCDC1P59894 354 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 GPLD1P80108 840 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 AMZ1Q400G9 498 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 PHF19Q5T6S3 580 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 ARHGAP40Q5TG30 622 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 PDPK2PQ6A1A2 396 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 CCDC70Q6NSX1 233 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 INO80CQ6PI98 192 aaPredicted RBP15.67■□□□□ 0.1
VRK3-221ENST00000600284 TMC3Q7Z5M5 1100 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 JAMLQ86YT9 394 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 CCDC170Q8IYT3 715 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 SFRP1Q8N474 314 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 TC2NQ8N9U0 490 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 OR4D9Q8NGE8 314 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 PATE1Q8WXA2 126 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 EID2BQ96D98 161 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 ZSCAN5AQ9BUG6 496 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 TRIM5Q9C035 493 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 CARD9Q9H257 536 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 SEMA6CQ9H3T2 930 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 GLOD4Q9HC38 313 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 SEPT10Q9P0V9 454 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 PISDQ9UG56 409 aa15.67■□□□□ 0.1
VRK3-221ENST00000600284 IGHV1OR21-1A0A087WYE8 117 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 A0A0A6YYK5 440 aaPredicted RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 FADS2P1A8MWK0 482 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 ATP1A1P05023 1023 aaKnown RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 TNNT1P13805 278 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 CD82P27701 267 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 NOP2P46087 812 aaKnown RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 DYNLT1P63172 113 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 GALNT3Q14435 633 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 PRKD1Q15139 912 aaPredicted RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 TFDP3Q5H9I0 405 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 ZNF574Q6ZN55 896 aaPredicted RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 CCDC81Q6ZN84 652 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 USP53Q70EK8 1073 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 CHST15Q7LFX5 561 aaPredicted RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 LYSMD3Q7Z3D4 306 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 TFB1MQ8WVM0 346 aaKnown RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 CCNL2Q96S94 520 aaPredicted RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 NUDT22Q9BRQ3 303 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 SPATA16Q9BXB7 569 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 CEP41Q9BYV8 373 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 RDH14Q9HBH5 336 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 LUC7LQ9NQ29 371 aaKnown RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 KCNK4Q9NYG8 393 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 HYOU1Q9Y4L1 999 aa15.66■□□□□ 0.1
VRK3-221ENST00000600284 OAS3Q9Y6K5 1087 aaKnown RBP15.66■□□□□ 0.1
VRK3-221ENST00000600284 IGHV5-10-1A0A0J9YXX1 117 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 NUAK1O60285 661 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 CST8O60676 142 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 ZRANB2O95218 330 aaKnown RBP eCLIP15.65■□□□□ 0.1
VRK3-221ENST00000600284 NDST3O95803 873 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 LIPCP11150 499 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 SLC2A4P14672 509 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 ITIH1P19827 911 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 PTPN3P26045 913 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 CLCNKAP51800 687 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 LIMK2P53671 638 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 C19orf57Q0VDD7 668 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 ZNF569Q5MCW4 686 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.65■□□□□ 0.1
VRK3-221ENST00000600284 TMEM164Q5U3C3 297 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 IYDQ6PHW0 289 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 SPOCD1Q6ZMY3 1216 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 KDELC2Q7Z4H8 507 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 KATNAL2Q8IYT4 538 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 RCOR2Q8IZ40 523 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 TRAM1L1Q8N609 369 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 AVL9Q8NBF6 648 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 GPR26Q8NDV2 337 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 P3H4Q92791 437 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 SH3KBP1Q96B97 665 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 CALR3Q96L12 384 aaKnown RBP15.65■□□□□ 0.1
VRK3-221ENST00000600284 VAT1Q99536 393 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 HERPUD2Q9BSE4 406 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 STN1Q9H668 368 aaKnown RBP15.65■□□□□ 0.1
VRK3-221ENST00000600284 TRIM39Q9HCM9 518 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 SARS2Q9NP81 518 aaKnown RBP15.65■□□□□ 0.1
VRK3-221ENST00000600284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.65■□□□□ 0.1
VRK3-221ENST00000600284 ZNF711Q9Y462 761 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms