RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 DAB2P98082 770 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 TAF1AQ15573 450 aaPredicted RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 CHRNA6Q15825 494 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 ATP13A5Q4VNC0 1218 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 C6orf132Q5T0Z8 1188 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 ZCCHC8Q6NZY4 707 aaKnown RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 FAM151BQ6UXP7 276 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 MICALCLQ6ZW33 695 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 TAF8Q7Z7C8 310 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 GKN2Q86XP6 184 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 NRROSQ86YC3 692 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 SFTPA2Q8IWL1 248 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 FAM181AQ8N9Y4 354 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 OR4K2Q8NGD2 314 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 OR52K1Q8NGK4 314 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 OR13C4Q8NGS5 318 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 BRSK1Q8TDC3 778 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 MAGOHBQ96A72 148 aaKnown RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 SCARF2Q96GP6 870 aaPredicted RBP15.09■□□□□ 0.01
LIG1-219ENST00000600055 PLEKHG4BQ96PX9 1271 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 ZSCAN5AQ9BUG6 496 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 BOCQ9BWV1 1114 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.09■□□□□ 0.01
LIG1-219ENST00000600055 SIRPGQ9P1W8 387 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 WASF3Q9UPY6 502 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 PKP3Q9Y446 797 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 PRKAB1Q9Y478 270 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 GPSM3Q9Y4H4 160 aa15.09■□□□□ 0.01
LIG1-219ENST00000600055 LRP4O75096 1905 aa15.08■□□□□ 0
LIG1-219ENST00000600055 C2orf81A6NN90 581 aa15.08■□□□□ 0
LIG1-219ENST00000600055 GAPDHSO14556 408 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 FANCGO15287 622 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A9O60656 530 aa15.08■□□□□ 0
LIG1-219ENST00000600055 DNAJC6O75061 913 aa15.08■□□□□ 0
LIG1-219ENST00000600055 MTX2O75431 263 aa15.08■□□□□ 0
LIG1-219ENST00000600055 SLC25A14O95258 325 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 CKMT1AP12532 417 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A6P19224 532 aa15.08■□□□□ 0
LIG1-219ENST00000600055 LPOP22079 712 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A1P22309 533 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A4P22310 534 aa15.08■□□□□ 0
LIG1-219ENST00000600055 ACP1P24666 158 aa15.08■□□□□ 0
LIG1-219ENST00000600055 AK4P27144 223 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A3P35503 534 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A5P35504 534 aa15.08■□□□□ 0
LIG1-219ENST00000600055 ADCY8P40145 1251 aa15.08■□□□□ 0
LIG1-219ENST00000600055 LMAN1P49257 510 aa15.08■□□□□ 0
LIG1-219ENST00000600055 TMPRSS15P98073 1019 aa15.08■□□□□ 0
LIG1-219ENST00000600055 SEMA5AQ13591 1074 aa15.08■□□□□ 0
LIG1-219ENST00000600055 TRIP13Q15645 432 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 PYCR3Q53H96 274 aa15.08■□□□□ 0
LIG1-219ENST00000600055 DHRS13Q6UX07 377 aa15.08■□□□□ 0
LIG1-219ENST00000600055 RAB44Q7Z6P3 723 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 SLC35F3Q8IY50 421 aa15.08■□□□□ 0
LIG1-219ENST00000600055 ACTRT1Q8TDG2 376 aa15.08■□□□□ 0
LIG1-219ENST00000600055 ADAMTS14Q8WXS8 1223 aa15.08■□□□□ 0
LIG1-219ENST00000600055 GLYATL1Q969I3 302 aa15.08■□□□□ 0
LIG1-219ENST00000600055 LRRC45Q96CN5 670 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A7Q9HAW7 530 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A10Q9HAW8 530 aa15.08■□□□□ 0
LIG1-219ENST00000600055 UGT1A8Q9HAW9 530 aa15.08■□□□□ 0
LIG1-219ENST00000600055 HOMER3Q9NSC5 361 aa15.08■□□□□ 0
LIG1-219ENST00000600055 ATXN10Q9UBB4 475 aa15.08■□□□□ 0
LIG1-219ENST00000600055 GULP1Q9UBP9 304 aa15.08■□□□□ 0
LIG1-219ENST00000600055 FEZ2Q9UHY8 353 aaPredicted RBP15.08■□□□□ 0
LIG1-219ENST00000600055 FKBPLQ9UIM3 349 aa15.08■□□□□ 0
LIG1-219ENST00000600055 GPR34Q9UPC5 381 aa15.08■□□□□ 0
LIG1-219ENST00000600055 CNOT1A5YKK6 2376 aaKnown RBP15.08■□□□□ 0
LIG1-219ENST00000600055 GLYATL1P3A0A0U1RQE8 302 aa15.07■□□□□ 0
LIG1-219ENST00000600055 E7EVH7 732 aa15.07■□□□□ 0
LIG1-219ENST00000600055 CCL22O00626 93 aa15.07■□□□□ 0
LIG1-219ENST00000600055 LDB2O43679 373 aa15.07■□□□□ 0
LIG1-219ENST00000600055 RFPL3O75679 317 aa15.07■□□□□ 0
LIG1-219ENST00000600055 ZNF8P17098 575 aaPredicted RBP15.07■□□□□ 0
LIG1-219ENST00000600055 ZNF140P52738 457 aaPredicted RBP15.07■□□□□ 0
LIG1-219ENST00000600055 TERF1P54274 439 aa15.07■□□□□ 0
LIG1-219ENST00000600055 FOXK2Q01167 660 aa15.07■□□□□ 0
LIG1-219ENST00000600055 CTBSQ01459 385 aa15.07■□□□□ 0
LIG1-219ENST00000600055 POU6F1Q14863 301 aa15.07■□□□□ 0
LIG1-219ENST00000600055 KHDC1Q4VXA5 237 aaKnown RBP15.07■□□□□ 0
LIG1-219ENST00000600055 PDPK2PQ6A1A2 396 aa15.07■□□□□ 0
LIG1-219ENST00000600055 GUSBP11Q6P575 273 aa15.07■□□□□ 0
LIG1-219ENST00000600055 LVRNQ6Q4G3 990 aa15.07■□□□□ 0
LIG1-219ENST00000600055 ADGRG6Q86SQ4 1221 aa15.07■□□□□ 0
LIG1-219ENST00000600055 MARCH9Q86YJ5 346 aa15.07■□□□□ 0
LIG1-219ENST00000600055 KYQ8NBH2 561 aa15.07■□□□□ 0
LIG1-219ENST00000600055 FAM46DQ8NEK8 389 aa15.07■□□□□ 0
LIG1-219ENST00000600055 GPBAR1Q8TDU6 330 aa15.07■□□□□ 0
LIG1-219ENST00000600055 OR2M4Q96R27 311 aa15.07■□□□□ 0
LIG1-219ENST00000600055 NAP1L3Q99457 506 aaPredicted RBP15.07■□□□□ 0
LIG1-219ENST00000600055 SCNM1Q9BWG6 230 aa15.07■□□□□ 0
LIG1-219ENST00000600055 OR2AG1Q9H205 316 aa15.07■□□□□ 0
LIG1-219ENST00000600055 SPATS2LQ9NUQ6 558 aaKnown RBP15.07■□□□□ 0
LIG1-219ENST00000600055 TRNAU1APQ9NX07 287 aaKnown RBP15.07■□□□□ 0
LIG1-219ENST00000600055 VPS18Q9P253 973 aa15.07■□□□□ 0
LIG1-219ENST00000600055 ZNHIT2Q9UHR6 403 aa15.07■□□□□ 0
LIG1-219ENST00000600055 KLK13Q9UKR3 277 aa15.07■□□□□ 0
LIG1-219ENST00000600055 ARID1BQ8NFD5 2236 aaPredicted RBP15.07■□□□□ 0
LIG1-219ENST00000600055 CACNA1AO00555 2505 aa15.06■□□□□ 0
LIG1-219ENST00000600055 CCDC78A2IDD5 438 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms