RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 FAM151BQ6UXP7 276 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 MARK2Q7KZI7 788 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 NRROSQ86YC3 692 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 KLHL7Q8IXQ5 586 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 PNPLA1Q8N8W4 532 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 CPT1BQ92523 772 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 CCDC97Q96F63 343 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 DNAJC1Q96KC8 554 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 ZNF778Q96MU6 729 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 PLEKHG4BQ96PX9 1271 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 TOR4AQ9NXH8 423 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 MOSPD1Q9UJG1 213 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 SUFUQ9UMX1 484 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 PRKAB1Q9Y478 270 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 U3KQA8 63 aa14.1□□□□□ -0.15
SHKBP1-217ENST00000598558 MROH6A6NGR9 719 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 C2orf81A6NN90 581 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 E7EVH7 732 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 DNAJC6O75061 913 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 TMEM63AO94886 807 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 TNFP01375 233 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 PRSS56P0CW18 603 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 CEACAM1P13688 526 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 PSMA3P25788 255 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 IVDP26440 423 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 SPAM1P38567 509 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 GRK6P43250 576 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 MAGEA6P43360 314 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 LMAN1P49257 510 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 CDKN1CP49918 316 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 ARSDP51689 593 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 MRPS25P82663 173 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 CDH17Q12864 832 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 TRIP6Q15654 476 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 PROX2Q3B8N5 592 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 C4orf22Q6V702 233 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 ADGRG6Q86SQ4 1221 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 LINC00523Q86TU6 105 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 SLCO6A1Q86UG4 719 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 OR4C6Q8NH72 309 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 NAT14Q8WUY8 206 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 BTN2A2Q8WVV5 523 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 GLYATL1Q969I3 302 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 SLC13A1Q9BZW2 595 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 FAM96AQ9H5X1 160 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 CARS2Q9HA77 564 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 EIF2B3Q9NR50 452 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 ATXN10Q9UBB4 475 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 SPASTQ9UBP0 616 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 SLC2A6Q9UGQ3 507 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 PCYOX1Q9UHG3 505 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 FEZ2Q9UHY8 353 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 CSNK1G3Q9Y6M4 447 aa14.09□□□□□ -0.15
SHKBP1-217ENST00000598558 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 AVILO75366 819 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 CRTAMO95727 393 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 IVLP07476 585 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 ZNF8P17098 575 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 KCNA4P22459 653 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 KELP23276 732 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 AK4P27144 223 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 GNPDA1P46926 289 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 SESN2P58004 480 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 CRADDP78560 199 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 DNAJC3Q13217 504 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 SEPT6Q14141 434 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 PYCR3Q53H96 274 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 N4BP2L1Q5TBK1 243 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 PPP1R21Q6ZMI0 780 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 DGLUCYQ7Z3D6 616 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 CAND1Q86VP6 1230 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 DNAAF3Q8N9W5 541 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 DTX3LQ8TDB6 740 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 TBATAQ96M53 351 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 ZSCAN5AQ9BUG6 496 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 CDH19Q9H159 772 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 RAD18Q9NS91 495 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 NLE1Q9NVX2 485 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 PKP3Q9Y446 797 aa14.08□□□□□ -0.16
SHKBP1-217ENST00000598558 GOLGA6L10A0A0M3HER8 536 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 OR51F1A6NGY5 319 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 LMO7DNF2Z398 122 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 H3BM21 787 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 CASC3O15234 703 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 SLC25A14O95258 325 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 ASMTLO95671 621 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 ECEL1O95672 775 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 PYGLP06737 847 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 TPSB2P20231 275 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 ADCY8P40145 1251 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 SIM1P81133 766 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 TPSAB1Q15661 275 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 PDPK2PQ6A1A2 396 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 GLRX5Q86SX6 157 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 AGGF1Q8N302 714 aaeCLIP14.07□□□□□ -0.167e-20■■■■□ 22.6
SHKBP1-217ENST00000598558 NAT8LQ8N9F0 302 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 ZNF398Q8TD17 642 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 GPBAR1Q8TDU6 330 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms