RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 UGT1A5P35504 534 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ADCY8P40145 1251 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 GRIA1P42261 906 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 CTBSQ01459 385 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ELOCQ15369 112 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 LONRF2Q1L5Z9 754 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 P3H1Q32P28 736 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ATP13A5Q4VNC0 1218 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 PYCR3Q53H96 274 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 PERM1Q5SV97 790 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 C6orf132Q5T0Z8 1188 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ZCCHC8Q6NZY4 707 aaKnown RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 TTC27Q6P3X3 843 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 GUSBP11Q6P575 273 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 DRICH1Q6PGQ1 229 aaPredicted RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 OGFOD3Q6PK18 319 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 GLT6D1Q7Z4J2 308 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 TRAM1L1Q8N609 369 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 KYQ8NBH2 561 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 GPBAR1Q8TDU6 330 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 FERMT1Q9BQL6 677 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 DUSP23Q9BVJ7 150 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 SPATA16Q9BXB7 569 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 TMEM121BQ9BXQ6 578 aaPredicted RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 TRABDQ9H4I3 376 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A7Q9HAW7 530 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A10Q9HAW8 530 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 UGT1A8Q9HAW9 530 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ATXN10Q9UBB4 475 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ANGPTL2Q9UKU9 493 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 DRG1Q9Y295 367 aaKnown RBP11.06□□□□□ -0.64
VRK3-210ENST00000596121 PCDHGA1Q9Y5H4 931 aa11.06□□□□□ -0.64
VRK3-210ENST00000596121 ARHGEF17Q96PE2 2063 aaPredicted RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 PTPRBP23467 1997 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 CPED1A4D0V7 1026 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 CCL22O00626 93 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 ZNF185O15231 689 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 LDB2O43679 373 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 NOBOXO60393 691 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 MTX2O75431 263 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 TRIM16O95361 564 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 AP2A1O95782 977 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 EML2O95834 649 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 PYGLP06737 847 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 ALPPL2P10696 532 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 ZNF8P17098 575 aaPredicted RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 RP1P56715 2156 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 DAB2P98082 770 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 XIAPP98170 497 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 SMAD1Q15797 465 aaKnown RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 LVRNQ6Q4G3 990 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 FAM151BQ6UXP7 276 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 TMPRSS7Q7RTY8 843 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 TAF8Q7Z7C8 310 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 ADGRG6Q86SQ4 1221 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 C17orf53Q8N3J3 647 aaPredicted RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 FAM46DQ8NEK8 389 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 GPR156Q8NFN8 814 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 OR4K2Q8NGD2 314 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 OR13C4Q8NGS5 318 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 ANP32BQ92688 251 aaKnown RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 GLYATL1Q969I3 302 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 CCDC97Q96F63 343 aaPredicted RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 PBKQ96KB5 322 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 PLEKHG4BQ96PX9 1271 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 SRPK1Q96SB4 655 aaKnown RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 OSBPL9Q96SU4 736 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 ZSCAN5AQ9BUG6 496 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 AP1M1Q9BXS5 423 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 HACD3Q9P035 362 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 SIRPGQ9P1W8 387 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 GULP1Q9UBP9 304 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 RABGEF1Q9UJ41 708 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 TTC7AQ9ULT0 858 aaPredicted RBP11.05□□□□□ -0.64
VRK3-210ENST00000596121 GPR34Q9UPC5 381 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 GPSM3Q9Y4H4 160 aa11.05□□□□□ -0.64
VRK3-210ENST00000596121 IGF2RP11717 2491 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 EME2A4GXA9 379 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 KIF5CO60282 957 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 NUAK1O60285 661 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 ZNF189O75820 626 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 SUN1O94901 812 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 ASMTLO95671 621 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 LPOP22079 712 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 ZNF140P52738 457 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 SEMA5AQ13591 1074 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 NR0B2Q15466 257 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 TAF1AQ15573 450 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 CCNI2Q6ZMN8 369 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 EFL1Q7Z2Z2 1120 aaKnown RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 C17orf82Q86X59 251 aaPredicted RBP11.04□□□□□ -0.64
VRK3-210ENST00000596121 GKN2Q86XP6 184 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 ZNF547Q8IVP9 402 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 OR52K1Q8NGK4 314 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 IFI44Q8TCB0 444 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 DTX3LQ8TDB6 740 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 BRSK1Q8TDC3 778 aa11.04□□□□□ -0.64
VRK3-210ENST00000596121 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms