RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RAD1O60671 282 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 CLDN7O95471 211 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 SERPING1P05155 500 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 CYP1A2P05177 515 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 LIFP15018 202 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 CCNCP24863 283 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 MAN1A1P33908 653 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 RPL26P61254 145 aaKnown RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 DPYSL3Q14195 570 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 CLCA4Q14CN2 919 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 NFKBIBQ15653 356 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 SNAP47Q5SQN1 464 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 CHST15Q7LFX5 561 aaPredicted RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 SYN2Q92777 582 aaPredicted RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 FATE1Q969F0 183 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 TEFMQ96QE5 360 aaKnown RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 ZNF670Q9BS34 389 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 ADNPQ9H2P0 1102 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 PCDH9Q9HC56 1237 aa22.47■■□□□ 1.19
SSBP4-203ENST00000593641 SARS2Q9NP81 518 aaKnown RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 RPL26L1Q9UNX3 145 aaKnown RBP22.47■■□□□ 1.19
SSBP4-203ENST00000593641 C1orf232A0A0U1RR37 186 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 A0A1W2PQJ5 194 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 ARHGAP6O43182 974 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 ATP1A1P05023 1023 aaKnown RBP22.46■■□□□ 1.19
SSBP4-203ENST00000593641 SLC2A4P14672 509 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 MX2P20592 715 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.46■■□□□ 1.19
SSBP4-203ENST00000593641 ANKS6Q68DC2 871 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 KCTD6Q8NC69 237 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 SH3KBP1Q96B97 665 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 LYSMD1Q96S90 227 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 RMI1Q9H9A7 625 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 PKD2L2Q9NZM6 624 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 PDP2Q9P2J9 529 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 PRKAB1Q9Y478 270 aa22.46■■□□□ 1.19
SSBP4-203ENST00000593641 A8MU76 341 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 DNAJC6O75061 913 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 EML2O95834 649 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 ACP5P13686 325 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 ARSEP51690 589 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 NFATC2Q13469 925 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 ANKRD20A8PQ5CZ79 823 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 WDR74Q6RFH5 385 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-203ENST00000593641 SLC9B2Q86UD5 537 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 MAP7D3Q8IWC1 876 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 ZNF564Q8TBZ8 553 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-203ENST00000593641 CCHCR1Q8TD31 782 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 KIAA1143Q96AT1 154 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-203ENST00000593641 TSGA13Q96PP4 275 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 HERPUD2Q9BSE4 406 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 TBC1D29Q9UFV1 150 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 KCNK6Q9Y257 313 aa22.45■■□□□ 1.18
SSBP4-203ENST00000593641 OAS3Q9Y6K5 1087 aaKnown RBP22.45■■□□□ 1.18
SSBP4-203ENST00000593641 A0A087X0T9 212 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 NBASA2RRP1 2371 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 ZNF891A8MT65 544 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 CAPN5O15484 640 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 PRLP01236 227 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 HLA-DQB2P05538 268 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 FAM228BP0C875 321 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 SPINT3P49223 89 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 TPM4P67936 248 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 IHHQ14623 411 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 PDK2Q15119 407 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 HENMT1Q5T8I9 393 aaKnown RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 ALKBH5Q6P6C2 394 aaKnown RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 CEACAM20Q6UY09 585 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 NLGN4XQ8N0W4 816 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 BMPERQ8N8U9 685 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 NLGN4YQ8NFZ3 816 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 ARRDC2Q8TBH0 407 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 NCSTNQ92542 709 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 RTP4Q96DX8 246 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 CATSPER2Q96P56 530 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 FAM83DQ9H4H8 585 aa22.44■■□□□ 1.18
SSBP4-203ENST00000593641 PCYT1BQ9Y5K3 369 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-203ENST00000593641 SNX2O60749 519 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 MAPK9P45984 424 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 CCR10P46092 362 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 EPHA4P54764 986 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 POLE2P56282 527 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 ZBED6P86452 979 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 NIPAL4Q0D2K0 466 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 ATP13A4Q4VNC1 1196 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 ZFYVE27Q5T4F4 411 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 IYDQ6PHW0 289 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 LYSMD3Q7Z3D4 306 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 PHYKPLQ8IUZ5 450 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 AVL9Q8NBF6 648 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 CCNYQ8ND76 341 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 ZNF830Q96NB3 372 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-203ENST00000593641 ZPBPQ9BS86 351 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 EFHD1Q9BUP0 239 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 MLPHQ9BV36 600 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-203ENST00000593641 GPN2Q9H9Y4 310 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-203ENST00000593641 PILRAQ9UKJ1 303 aa22.43■■□□□ 1.18
SSBP4-203ENST00000593641 CNOT6Q9ULM6 557 aaKnown RBP22.43■■□□□ 1.18
SSBP4-203ENST00000593641 DOPEY2Q9Y3R5 2298 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms