RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FADS2P1A8MWK0 482 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 GOLGA6L6A8MZA4 724 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 H7C0C1 242 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ZW10O43264 779 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ECEL1O95672 775 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 EPOP01588 193 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ATP1A1P05023 1023 aaKnown RBP15.15■□□□□ 0.02
TRIM28-203ENST00000593582 RBMS1P29558 406 aaKnown RBP15.15■□□□□ 0.02
TRIM28-203ENST00000593582 PTPN7P35236 360 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ABCG1P45844 678 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ATP5OP48047 213 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 PDX1P52945 283 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 MAZP56270 477 aaKnown RBP15.15■□□□□ 0.02
TRIM28-203ENST00000593582 WNT3AP56704 352 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 DCDC1P59894 354 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ERVPABLB-1P60509 514 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 KIF5AQ12840 1032 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ZNF569Q5MCW4 686 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ALS2CLQ60I27 953 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 TMC3Q7Z5M5 1100 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 SPRED1Q7Z699 444 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ZNF567Q8N184 647 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 LRRC57Q8N9N7 239 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 WDR36Q8NI36 951 aaKnown RBP15.15■□□□□ 0.02
TRIM28-203ENST00000593582 TMEM74Q96NL1 305 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 FCRL5Q96RD9 977 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 OSBPL8Q9BZF1 889 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 STRADBQ9C0K7 418 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 RMI1Q9H9A7 625 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 THSD1Q9NS62 852 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 RALYQ9UKM9 306 aaKnown RBP15.15■□□□□ 0.02
TRIM28-203ENST00000593582 PCDHGA8Q9Y5G5 932 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 ST14Q9Y5Y6 855 aa15.15■□□□□ 0.02
TRIM28-203ENST00000593582 OAS3Q9Y6K5 1087 aaKnown RBP15.15■□□□□ 0.02
TRIM28-203ENST00000593582 LOC400499M0QZD8 3231 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 RP1P56715 2156 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 CCDC187A0A096LP49 1063 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 LOC285095A0A1B0GVY8 99 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 GRID2IPA4D2P6 1211 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 TJP3O95049 919 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 INHBCP55103 352 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 PCBP4P57723 403 aaKnown RBP15.14■□□□□ 0.01
TRIM28-203ENST00000593582 OTUD4Q01804 1114 aaKnown RBP15.14■□□□□ 0.01
TRIM28-203ENST00000593582 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 PDPK2PQ6A1A2 396 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 FOXR1Q6PIV2 292 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 IGF2-ASQ6U949 168 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 PEX26Q7Z412 305 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 C17orf82Q86X59 251 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-203ENST00000593582 TMEM139Q8IV31 216 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 SYCE1Q8N0S2 351 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 ARL14Q8N4G2 192 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 UBL4BQ8N7F7 174 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 GPR26Q8NDV2 337 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 ZNF248Q8NDW4 579 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 ACTL9Q8TC94 416 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 LIN37Q96GY3 246 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-203ENST00000593582 FOXP3Q9BZS1 431 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 TRABDQ9H4I3 376 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 NFKBIL1Q9UBC1 381 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-203ENST00000593582 RSPH14Q9UHP6 348 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 AMFRQ9UKV5 643 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 PLEKHM1Q9Y4G2 1056 aa15.14■□□□□ 0.01
TRIM28-203ENST00000593582 F5H423 210 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 DNAJC6O75061 913 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 STK10O94804 968 aaKnown RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 SLC25A14O95258 325 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 PTMAP06454 111 aaKnown RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 PYGMP11217 842 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 RBL1P28749 1068 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 ALDH4A1P30038 563 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 EIF3IQ13347 325 aaKnown RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 MPP3Q13368 585 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 SIRPB2Q5JXA9 342 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 ITPRIPL1Q6GPH6 555 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 KDELC1Q6UW63 502 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 CHST15Q7LFX5 561 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 B3GNT8Q7Z7M8 397 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 NAGSQ8N159 534 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 SLC25A41Q8N5S1 370 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 TRAM1L1Q8N609 369 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 IPMKQ8NFU5 416 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 PATE1Q8WXA2 126 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 ALG3Q92685 438 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 OXNAD1Q96HP4 312 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-203ENST00000593582 MRGPRX2Q96LB1 330 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 SLC46A1Q96NT5 459 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 HERPUD2Q9BSE4 406 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 FSD1LQ9BXM9 530 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 CARD9Q9H257 536 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 EPB41L5Q9HCM4 733 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 ASCL3Q9NQ33 180 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 PRKAB1Q9Y478 270 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 SPO11Q9Y5K1 396 aa15.13■□□□□ 0.01
TRIM28-203ENST00000593582 FAM208BQ5VWN6 2430 aa15.12■□□□□ 0.01
TRIM28-203ENST00000593582 A0A1W2PNU3 283 aaPredicted RBP15.12■□□□□ 0.01
TRIM28-203ENST00000593582 MIF4GDA9UHW6 222 aaKnown RBP15.12■□□□□ 0.01
TRIM28-203ENST00000593582 GPR89AB7ZAQ6 455 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms