RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 RNF157Q96PX1 679 aa17.8■□□□□ 0.44
CIRBP-243ENST00000593128 MLPHQ9BV36 600 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-243ENST00000593128 FAM83DQ9H4H8 585 aa17.8■□□□□ 0.44
CIRBP-243ENST00000593128 AMACRQ9UHK6 382 aa17.8■□□□□ 0.44
CIRBP-243ENST00000593128 ACSL6Q9UKU0 697 aa17.8■□□□□ 0.44
CIRBP-243ENST00000593128 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
CIRBP-243ENST00000593128 PCYT1BQ9Y5K3 369 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-243ENST00000593128 OAS3Q9Y6K5 1087 aaKnown RBP17.8■□□□□ 0.44
CIRBP-243ENST00000593128 EML2O95834 649 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 KRT1P04264 644 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 PIRTP0C851 137 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 FGF3P11487 239 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-243ENST00000593128 SPINT3P49223 89 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 LIMK2P53671 638 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 RPL26P61254 145 aaKnown RBP17.79■□□□□ 0.44
CIRBP-243ENST00000593128 DYNLT1P63172 113 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 CYP4F2P78329 520 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 ZBTB17Q13105 803 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 NR1D2Q14995 579 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 RFX6Q8HWS3 928 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 OR4D9Q8NGE8 314 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 OR10G6Q8NH81 332 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 ART4Q93070 314 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 PMEPA1Q969W9 287 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 SCARF2Q96GP6 870 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-243ENST00000593128 COX14Q96I36 57 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 AGAP3Q96P47 875 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 ADGRE3Q9BY15 652 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 SPTLC3Q9NUV7 552 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 LCMT1Q9UIC8 334 aa17.79■□□□□ 0.44
CIRBP-243ENST00000593128 RPL26L1Q9UNX3 145 aaKnown RBP17.79■□□□□ 0.44
CIRBP-243ENST00000593128 EFCAB7A8K855 629 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 FADS2P1A8MWK0 482 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 STMND1H3BQB6 276 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 J3QKU1 62 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 APOL1O14791 398 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 HGSO14964 777 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-243ENST00000593128 MMP2P08253 660 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 TPM1P09493 284 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 TMEM253P0C7T8 217 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 NFATC3Q12968 1075 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 LRP8Q14114 963 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 ZNF648Q5T619 568 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-243ENST00000593128 NPNTQ6UXI9 565 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 LYSMD3Q7Z3D4 306 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 PRICKLE2Q7Z3G6 844 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 AGBL5Q8NDL9 886 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 OR8K1Q8NGG5 319 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 SLC35G2Q8TBE7 412 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 FATE1Q969F0 183 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 TAAR9Q96RI9 348 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 SPATA16Q9BXB7 569 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 BRD8Q9H0E9 1235 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 OSGEPL1Q9H4B0 414 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 STN1Q9H668 368 aaKnown RBP17.78■□□□□ 0.44
CIRBP-243ENST00000593128 SLC39A1Q9NY26 324 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 SHOC2Q9UQ13 582 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 PCDHGA4Q9Y5G9 962 aa17.78■□□□□ 0.44
CIRBP-243ENST00000593128 ANKRD66B4E2M5 251 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 B8ZZF3 427 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 CBFA2T2O43439 604 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 DUX1O43812 170 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 SLC28A2O43868 658 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 DNAJC6O75061 913 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 MAN1A1P33908 653 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 ATP1A2P50993 1020 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 HHEXQ03014 270 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 PPIDQ08752 370 aaKnown RBP17.77■□□□□ 0.44
CIRBP-243ENST00000593128 CLPPQ16740 277 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-243ENST00000593128 PLA2G4EQ3MJ16 856 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 NLRP8Q86W28 1048 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 IL22RA1Q8N6P7 574 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 NCSTNQ92542 709 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 RNF25Q96BH1 459 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-243ENST00000593128 WDR24Q96S15 920 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 OCIAD1Q9NX40 245 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 VPS18Q9P253 973 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 TBC1D29Q9UFV1 150 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 KLHL3Q9UH77 587 aa17.77■□□□□ 0.44
CIRBP-243ENST00000593128 CNOT6Q9ULM6 557 aaKnown RBP17.77■□□□□ 0.44
CIRBP-243ENST00000593128 SDK2Q58EX2 2172 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 FAM87AP0C7U9 286 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 THRAP10827 490 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 WT1P19544 449 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-243ENST00000593128 CD82P27701 267 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 HNRNPH3P31942 346 aaKnown RBP17.76■□□□□ 0.43
CIRBP-243ENST00000593128 GPLD1P80108 840 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 TRA2AQ13595 282 aaKnown RBP eCLIP17.76■□□□□ 0.43
CIRBP-243ENST00000593128 TRIM14Q14142 442 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 ZNF569Q5MCW4 686 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 HENMT1Q5T8I9 393 aaKnown RBP17.76■□□□□ 0.43
CIRBP-243ENST00000593128 TMEM71Q6P5X7 295 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 CRTC3Q6UUV7 619 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 SFRP1Q8N474 314 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 PLD5Q8N7P1 536 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 CNTD1Q8N815 330 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 EXD3Q8N9H8 876 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 CCDC42Q96M95 316 aa17.76■□□□□ 0.43
CIRBP-243ENST00000593128 LYSMD1Q96S90 227 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms