RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PIM1P11309 404 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 FOXA1P55317 472 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 PDK3Q15120 406 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 TPGS2Q68CL5 300 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 PSAPL1Q6NUJ1 521 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 NCEH1Q6PIU2 408 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 TXNDC11Q6PKC3 985 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 LAYNQ6UX15 382 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 LINGO4Q6UY18 593 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 MIER2Q8N344 545 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 WBP2Q969T9 261 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 TRMT2BQ96GJ1 504 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 KCNA7Q96RP8 456 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 PKP2Q99959 881 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 FAM192AQ9GZU8 254 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 TMEM181Q9P2C4 612 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 TMCO1Q9UM00 188 aa16.48■□□□□ 0.23
PRKCSH-217ENST00000592741 SCN5AQ14524 2016 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 A0A0J9YYE9 177 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 H0Y626 953 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 CDC7O00311 574 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 NR5A2O00482 541 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 SNAP91O60641 907 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 ABLIM3O94929 683 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 LBPP18428 481 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 CD9P21926 228 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 RALGDSQ12967 914 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 C8orf82Q6P1X6 216 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 FUNDC1Q8IVP5 155 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 PIANPQ8IYJ0 282 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 LILRA2Q8N149 483 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 CARNMT1Q8N4J0 409 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 TTC30BQ8N4P2 665 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 FUBP1Q96AE4 644 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 TUBGCP3Q96CW5 907 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 BPIFA1Q9NP55 256 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 SEMA4BQ9NPR2 832 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 PTGDR2Q9Y5Y4 395 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 COMMD10Q9Y6G5 202 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 TANC1Q9C0D5 1861 aa16.47■□□□□ 0.23
PRKCSH-217ENST00000592741 TBL1XO60907 577 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 STAMBPO95630 424 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 CXCL10P02778 98 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 PPP3CCP48454 512 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 CLCN4P51793 760 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 CCL23P55773 120 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 IRX1P78414 480 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 GRB7Q14451 532 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 MAP7D1Q3KQU3 841 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 CTSL3PQ5NE16 218 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 EFL1Q7Z2Z2 1120 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 PHYKPLQ8IUZ5 450 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 SIDT2Q8NBJ9 832 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 PHC3Q8NDX5 983 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 PCDHAC1Q9H158 963 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 LHX3Q9UBR4 397 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 CD300AQ9UGN4 299 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 POLG2Q9UHN1 485 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 RAB26Q9ULW5 256 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 BTRCQ9Y297 605 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 FNDC3AQ9Y2H6 1198 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 NDUFAF1Q9Y375 327 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 TYW5A2RUC4 315 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 PRORSD1PA6NEY8 169 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 DENRO43583 198 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 KLK8O60259 260 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 NIPSNAP2O75323 286 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 LATS1O95835 1130 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 CD160O95971 181 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 MBL2P11226 248 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 IL2P60568 153 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 TWF1Q12792 350 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 GRM2Q14416 872 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 INO80DQ53TQ3 878 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 PRMT9Q6P2P2 845 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 FBXL19Q6PCT2 694 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 TICAM1Q8IUC6 712 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 ZNF483Q8TF39 744 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 LINGO1Q96FE5 620 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 SLC30A3Q99726 388 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 C1QTNF3Q9BXJ4 246 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 NUSAP1Q9BXS6 441 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 TUBB1Q9H4B7 451 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 SMPD4Q9NXE4 827 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 GALPQ9UBC7 116 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 GIMAP2Q9UG22 337 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 STOML2Q9UJZ1 356 aa16.46■□□□□ 0.23
PRKCSH-217ENST00000592741 E5RI56 91 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 H7C0S8 307 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 OR1I1O60431 355 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 SNX2O60749 519 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 MATN4O95460 622 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 MLYCDO95822 493 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 SOD2P04179 222 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 LINC00032P0C843 101 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 HGFP14210 728 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 HSPA13P48723 471 aa16.45■□□□□ 0.22
PRKCSH-217ENST00000592741 SLC7A2P52569 658 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms