RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PIEZO2Q9H5I5 2752 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 C1orf232A0A0U1RR37 186 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 OR5K4A6NMS3 321 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 HLA-DQB2P05538 268 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 TMEM253P0C7T8 217 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 FGF3P11487 239 aaPredicted RBP18.71■□□□□ 0.59
CCDC43-205ENST00000592333 PTMSP20962 102 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 ATP1A2P50993 1020 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 CLCNKAP51800 687 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 EPHA4P54764 986 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 GBE1Q04446 702 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 NIPAL4Q0D2K0 466 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 SLC14A2Q15849 920 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 RFLNAQ6ZTI6 216 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 ZFAND4Q86XD8 727 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 CCNYQ8ND76 341 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 LPCAT1Q8NF37 534 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 OR8K1Q8NGG5 319 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 PATE1Q8WXA2 126 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 TEFMQ96QE5 360 aaKnown RBP18.71■□□□□ 0.59
CCDC43-205ENST00000592333 DNAJC7Q99615 494 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 SLC38A3Q99624 504 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.71■□□□□ 0.59
CCDC43-205ENST00000592333 CARD9Q9H257 536 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 IFNKQ9P0W0 207 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 NFKBIL1Q9UBC1 381 aaPredicted RBP18.71■□□□□ 0.59
CCDC43-205ENST00000592333 CNOT6Q9ULM6 557 aaKnown RBP18.71■□□□□ 0.59
CCDC43-205ENST00000592333 TTLL3Q9Y4R7 772 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 PCDHGA4Q9Y5G9 962 aa18.71■□□□□ 0.59
CCDC43-205ENST00000592333 KIR2DS5A0A0G2JLQ3 304 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 A0A0G2JNG1 304 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 KIR2DS3K7RE56 304 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 DUX1O43812 170 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ASMTLO95671 621 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 CCL4P13236 92 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ZFXP17010 805 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-205ENST00000592333 TAS2R40P59535 323 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 DCDC1P59894 354 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 SLC10A2Q12908 348 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-205ENST00000592333 KIR2DS5Q14953 304 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 QPCTQ16769 361 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ASTE1Q2TB18 679 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-205ENST00000592333 LINC00303Q3SY05 128 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 PDPK2PQ6A1A2 396 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 IYDQ6PHW0 289 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 SLC37A2Q8TED4 501 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 AHCYL2Q96HN2 611 aaKnown RBP18.7■□□□□ 0.58
CCDC43-205ENST00000592333 WDR24Q96S15 920 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 AGAP2Q99490 1192 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ARHGAP9Q9BRR9 750 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ZPBPQ9BS86 351 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 XPO4Q9C0E2 1151 aaKnown RBP18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ZNHIT6Q9NWK9 470 aaKnown RBP18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ZNHIT2Q9UHR6 403 aa18.7■□□□□ 0.58
CCDC43-205ENST00000592333 ASH1LQ9NR48 2969 aaKnown RBP18.69■□□□□ 0.58
CCDC43-205ENST00000592333 CAPN5O15484 640 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-205ENST00000592333 JCHAINP01591 159 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 MMP2P08253 660 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 HHEXQ03014 270 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 PDK1Q15118 436 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 ZFYVE27Q5T4F4 411 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 LRRC38Q5VT99 294 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 SLC9A4Q6AI14 798 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 MARK2Q7KZI7 788 aaKnown RBP18.69■□□□□ 0.58
CCDC43-205ENST00000592333 LYSMD3Q7Z3D4 306 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 SLC9B2Q86UD5 537 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 RHOT2Q8IXI1 618 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 RCBTB1Q8NDN9 531 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 NKD1Q969G9 470 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 ANP32EQ9BTT0 268 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 DEF6Q9H4E7 631 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 MAGEE1Q9HCI5 957 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 PLEKHM1Q9Y4G2 1056 aa18.69■□□□□ 0.58
CCDC43-205ENST00000592333 A0A0U1RQS6 177 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 A6NCN8 305 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 INPP4BO15327 924 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 CBFA2T2O43439 604 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 NUAK1O60285 661 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 MTA2O94776 668 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 F3P13726 295 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 CSF2RBP32927 897 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 GJC1P36383 396 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 CD86P42081 329 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 DCAF12Q5T6F0 453 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 CHST15Q7LFX5 561 aaPredicted RBP18.68■□□□□ 0.58
CCDC43-205ENST00000592333 TRIM74Q86UV6 250 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 PLD5Q8N7P1 536 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 CNTD1Q8N815 330 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 RAPGEF5Q92565 580 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 SMIM14Q96QK8 99 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 ZSCAN5AQ9BUG6 496 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 MAK16Q9BXY0 300 aaKnown RBP18.68■□□□□ 0.58
CCDC43-205ENST00000592333 UCK1Q9HA47 277 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 ZFYVE1Q9HBF4 777 aa18.68■□□□□ 0.58
CCDC43-205ENST00000592333 FLNBO75369 2602 aaKnown RBP18.68■□□□□ 0.58
CCDC43-205ENST00000592333 PPP1R12AO14974 1030 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-205ENST00000592333 MAP3K6O95382 1288 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 ATP1A1P05023 1023 aaKnown RBP18.67■□□□□ 0.58
CCDC43-205ENST00000592333 NKAIN2Q5VXU1 208 aa18.67■□□□□ 0.58
CCDC43-205ENST00000592333 BZW1Q7L1Q6 419 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms