RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 IRGCQ6NXR0 463 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 IZUMO2Q6UXV1 221 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 GAREM2Q75VX8 874 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 TMC8Q8IU68 726 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 GPR65Q8IYL9 337 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 APCDD1Q8J025 514 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 SIDT2Q8NBJ9 832 aaKnown RBP15.66■□□□□ 0.1
MBD1-227ENST00000592060 PIH1D2Q8WWB5 315 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 ECSITQ9BQ95 431 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 C1QTNF3Q9BXJ4 246 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 LRRC3Q9BY71 257 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 P2RY12Q9H244 342 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 MAGEE1Q9HCI5 957 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.66■□□□□ 0.1
MBD1-227ENST00000592060 SARDHQ9UL12 918 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 PCDHB9Q9Y5E1 797 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 COMMD10Q9Y6G5 202 aa15.66■□□□□ 0.1
MBD1-227ENST00000592060 STX16-NPEPL1H3BU86 382 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 AZIN1O14977 448 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 PFDN6O15212 129 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 CLTBP09497 229 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 SPATA31D3P0C874 917 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 RAG1P15918 1043 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 LRP8Q14114 963 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 AGKQ53H12 422 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 REP15Q6BDI9 236 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 SPATA31D4Q6ZUB0 917 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 LYSMD3Q7Z3D4 306 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 PHYKPLQ8IUZ5 450 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 MFN1Q8IWA4 741 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 TWIST2Q8WVJ9 160 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 KCNJ9Q92806 393 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 USP13Q92995 863 aaPredicted RBP15.65■□□□□ 0.1
MBD1-227ENST00000592060 ZBP1Q9H171 429 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 FBRSL1Q9HCM7 1045 aaKnown RBP15.65■□□□□ 0.1
MBD1-227ENST00000592060 TRMT6Q9UJA5 497 aaKnown RBP15.65■□□□□ 0.1
MBD1-227ENST00000592060 ASB3Q9Y575 518 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 PCDHGA7Q9Y5G6 932 aa15.65■□□□□ 0.1
MBD1-227ENST00000592060 CARNS1A5YM72 827 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 SYCE1LA8MT33 242 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 NRG2O14511 850 aaPredicted RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 STX16O14662 325 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 CASQ2O14958 399 aaPredicted RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 CFLARO15519 480 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 GPR39O43194 453 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 GPC4O75487 556 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 SMNDC1O75940 238 aaKnown RBP eCLIP15.64■□□□□ 0.09
MBD1-227ENST00000592060 CTPS1P17812 591 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ITGB8P26012 769 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 GABRR2P28476 465 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 PTGER3P43115 390 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 PSMD8P48556 350 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 SLC7A9P82251 487 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 CLCQ05315 142 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 CACNG1Q06432 222 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 LCP2Q13094 533 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 STX5Q13190 355 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ARMC12Q5T9G4 340 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 HS6ST3Q8IZP7 471 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 CPXM2Q8N436 756 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 TRPC4APQ8TEL6 797 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 BHMTQ93088 406 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 MRPL1Q9BYD6 325 aaKnown RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 TM6SF2Q9BZW4 377 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 TUBB1Q9H4B7 451 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 CXorf56Q9H5V9 222 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 AKTIPQ9H8T0 292 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 CACNA2D2Q9NY47 1150 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 LSM7Q9UK45 103 aaKnown RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 PTGDR2Q9Y5Y4 395 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 A0A1B0GTL3 188 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ATP6AP2A0A1C7CYW4 349 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 BTN3A1O00481 513 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 GAPDHSO14556 408 aaPredicted RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 PIP5K1BO14986 540 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 SMAD6O43541 496 aaKnown RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 ATP6AP2O75787 350 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ESR1P03372 595 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ALPIP09923 528 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 BMP1P13497 986 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 GPX3P22352 226 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ME2P23368 584 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 HMGCLP35914 325 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 HK3P52790 923 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 KLC1Q07866 573 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 HTR3DQ70Z44 454 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 GRIN3AQ8TCU5 1115 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 ZNF483Q8TF39 744 aaPredicted RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 GDPD5Q8WTR4 605 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 LINGO1Q96FE5 620 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 KCNA7Q96RP8 456 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 C2orf49Q9BVC5 232 aaPredicted RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 FNDC3AQ9Y2H6 1198 aaKnown RBP15.64■□□□□ 0.09
MBD1-227ENST00000592060 PKP3Q9Y446 797 aa15.64■□□□□ 0.09
MBD1-227ENST00000592060 HTRA2O43464 458 aaPredicted RBP15.63■□□□□ 0.09
MBD1-227ENST00000592060 TGM5O43548 720 aa15.63■□□□□ 0.09
MBD1-227ENST00000592060 SNRPB2P08579 225 aaKnown RBP15.63■□□□□ 0.09
MBD1-227ENST00000592060 CNPP09543 421 aaKnown RBP15.63■□□□□ 0.09
MBD1-227ENST00000592060 PPM1AP35813 382 aa15.63■□□□□ 0.09
MBD1-227ENST00000592060 CSNK1DP48730 415 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms