RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PLA2G2AP14555 144 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 AGAP20933 346 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CD9P21926 228 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TMOD1P28289 359 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 HOXC13P31276 330 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CTNNA1P35221 906 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 KRT9P35527 623 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 ARL1P40616 181 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 MAGEA9P43362 315 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 GLUD2P49448 558 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CTCFP49711 727 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 TPM4P67936 248 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 BASP1P80723 227 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 MPP1Q00013 466 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 EGR4Q05215 589 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 LTBQ06643 244 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TRAF3Q13114 568 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 PLCB4Q15147 1175 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CLPPQ16740 277 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 TSTQ16762 297 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 IMMTQ16891 758 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 SPDYCQ5MJ68 293 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 SFMBT2Q5VUG0 894 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CAVIN1Q6NZI2 390 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 CFAP161Q6P656 301 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 FBXO46Q6PJ61 603 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 LCTLQ6UWM7 567 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 ABRAXAS1Q6UWZ7 409 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 PACS1Q6VY07 963 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 SHFQ7M4L6 423 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CATSPER4Q7RTX7 472 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 RPAP2Q8IXW5 612 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 SLC35F3Q8IY50 421 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 DCLK2Q8N568 766 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TTC39CQ8N584 583 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CLEC18CQ8NCF0 446 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 METTL6Q8TCB7 284 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 ELP5Q8TE02 316 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 DYDC1Q8WWB3 177 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 RFFLQ8WZ73 363 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 ZNF75CPQ92670 426 aaPredicted RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 FBXL8Q96CD0 374 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 PHF21BQ96EK2 531 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 SAAL1Q96ER3 474 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 SLX1AQ9BQ83 275 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 UQCC2Q9BRT2 126 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 H2AFJQ9BTM1 129 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 AP1M1Q9BXS5 423 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TKTL2Q9H0I9 626 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CLSTN2Q9H4D0 955 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 SYNCQ9H7C4 482 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 MAGEE1Q9HCI5 957 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 TCP11L1Q9NUJ3 509 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 WNT16Q9UBV4 365 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 AGO1Q9UL18 857 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 PAIP2BQ9ULR5 123 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 TMED5Q9Y3A6 229 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 NFE2L3Q9Y4A8 694 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 LSM4Q9Y4Z0 139 aaKnown RBP3.53□□□□□ -1.84
VMP1-212ENST00000591782 TAF1P21675 1872 aa3.53□□□□□ -1.84
VMP1-212ENST00000591782 CCDC144AA2RUR9 1427 aa3.53□□□□□ -1.85
VMP1-212ENST00000591782 ROCK2O75116 1388 aaKnown RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 LINC01553A4QN01 128 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 KIF2AO00139 706 aaPredicted RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 TAF4O00268 1085 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 TGFB1I1O43294 461 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 SERPINI2O75830 405 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 NDUFB4O95168 129 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 FGFR1OPO95684 399 aaKnown RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 TBX18O95935 607 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 CD4P01730 458 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 PRSS2P07478 247 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 T-ENOLP0DO92 83 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 IRF1P10914 325 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 UBL4AP11441 157 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 EEF2P13639 858 aaKnown RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 CHATP28329 748 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 ATP5DP30049 168 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 CCKARP32238 428 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 SHMT1P34896 483 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 CA8P35219 290 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 GCKP35557 465 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 CPOXP36551 454 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 CCT6AP40227 531 aaKnown RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 FNTAP49354 379 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 COMPP49747 757 aaPredicted RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 GNAQP50148 359 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 CCR9P51686 369 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 POLR2FP61218 127 aaKnown RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 TMF1P82094 1093 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 DR1Q01658 176 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 BNC1Q01954 994 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 LRRC74AQ0VAA2 488 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 SIM2Q14190 667 aaPredicted RBP3.52□□□□□ -1.85
VMP1-212ENST00000591782 ERV3-1Q14264 604 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 PSMD6Q15008 389 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 PPP1R7Q15435 360 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 TCTN1Q2MV58 587 aa3.52□□□□□ -1.85
VMP1-212ENST00000591782 C15orf59Q2T9L4 293 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms