RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 HELZ2Q9BYK8 2649 aaKnown RBP21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 TEX51A0A1B0GUA7 166 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 TMEM63AO94886 807 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 MAGEA6P43360 314 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 SPINT3P49223 89 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 CLDN6P56747 220 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 DNAJC3Q13217 504 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 MTM1Q13496 603 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 INPP5AQ14642 412 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 PPP1R21Q6ZMI0 780 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 Q6ZSR6 202 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 GPR155Q7Z3F1 870 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 LINC00523Q86TU6 105 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 SPATS2Q86XZ4 545 aaKnown RBP21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 SLC22A18ASQ8N1D0 253 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 GPR26Q8NDV2 337 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 DENND6BQ8NEG7 585 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 SNIP1Q8TAD8 396 aaKnown RBP21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 CCHCR1Q8TD31 782 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 C1QTNF7Q9BXJ2 289 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 ASIC3Q9UHC3 531 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 HS3ST3A1Q9Y663 406 aa21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 FLNBO75369 2602 aaKnown RBP21.37■■□□□ 1.01
R3HDM4-206ENST00000590454 TP53BP1Q12888 1972 aaPredicted RBP21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 ESPNB1AK53 854 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 FPGTO14772 594 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 RAD51CO43502 376 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 SOD1P00441 154 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 BPIP17213 487 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 TPSB2P20231 275 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 ADCY8P40145 1251 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 PFN3P60673 137 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 CKAP4Q07065 602 aaKnown RBP21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 POU6F1Q14863 301 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 TPSAB1Q15661 275 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 PRAMEF14Q5SWL7 426 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 HES3Q5TGS1 186 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 ALS2CLQ60I27 953 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 KYAT3Q6YP21 454 aaKnown RBP21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 PTAR1Q7Z6K3 402 aaPredicted RBP21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 DNAAF3Q8N9W5 541 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 MFSD2AQ8NA29 543 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 RUNDC3BQ96NL0 473 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 RIOK2Q9BVS4 552 aaKnown RBP21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 TRABDQ9H4I3 376 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 HACD3Q9P035 362 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 OR1A2Q9Y585 309 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 CABIN1Q9Y6J0 2220 aa21.36■■□□□ 1.01
R3HDM4-206ENST00000590454 BPTFQ12830 3046 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 TMEM131Q92545 1883 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 A6NNZ2 444 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 GOLGA8MH3BSY2 632 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 TLR4O00206 839 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 YKT6O15498 198 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 LDB2O43679 373 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 ZNF500O60304 480 aaPredicted RBP21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 THEGLP0DJG4 465 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 HMGCLP35914 325 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 ACADVLP49748 655 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 CDH17Q12864 832 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 DHX34Q14147 1143 aaKnown RBP21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 CCDC38Q502W7 563 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 PNCKQ6P2M8 343 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 NAT8LQ8N9F0 302 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 BRSK1Q8TDC3 778 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 SAP25Q8TEE9 199 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 FGF11Q92914 225 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 LRRC45Q96CN5 670 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 AP2M1Q96CW1 435 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 KLHDC7BQ96G42 594 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 TRIM31Q9BZY9 425 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 GPR27Q9NS67 375 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 PKD2L2Q9NZM6 624 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 IL17CQ9P0M4 197 aa21.35■■□□□ 1.01
R3HDM4-206ENST00000590454 COL5A1P20908 1838 aaPredicted RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 ASH1LQ9NR48 2969 aaKnown RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 CCDC78A2IDD5 438 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 AVILO75366 819 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 SESN2P58004 480 aaPredicted RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 NXPH1P58417 271 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 CRADDP78560 199 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 SEPT6Q14141 434 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 TAF1AQ15573 450 aaPredicted RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 RNASEH2BQ5TBB1 312 aaKnown RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 ESRP1Q6NXG1 681 aaKnown RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 SYDE1Q6ZW31 735 aaPredicted RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 NRSN1Q8IZ57 195 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 EID2Q8N6I1 236 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 OR13C4Q8NGS5 318 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 SRPK1Q96SB4 655 aaKnown RBP21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 LGR4Q9BXB1 951 aa21.34■■□□□ 1.01
R3HDM4-206ENST00000590454 FADS2P1A8MWK0 482 aa21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 CCL22O00626 93 aa21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 DNALI1O14645 258 aaPredicted RBP21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 LPOP22079 712 aaPredicted RBP21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 ZNF140P52738 457 aaPredicted RBP21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 TMPRSS15P98073 1019 aa21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 CFHR1Q03591 330 aa21.33■■□□□ 1.01
R3HDM4-206ENST00000590454 DPTQ07507 201 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms