RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
DNMT1-218ENST00000589294 CNOT6Q9ULM6 557 aaKnown RBP12.09□□□□□ -0.47
DNMT1-218ENST00000589294 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
DNMT1-218ENST00000589294 HCN4Q9Y3Q4 1203 aa12.09□□□□□ -0.47
DNMT1-218ENST00000589294 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
DNMT1-218ENST00000589294 WDR87Q6ZQQ6 2873 aa12.09□□□□□ -0.47
DNMT1-218ENST00000589294 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
DNMT1-218ENST00000589294 TRBV5-4A0A0C4DH59 114 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 CCDC78A2IDD5 438 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TLR4O00206 839 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 CACNB4O00305 520 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 CCL22O00626 93 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 CD3EAPO15446 510 aaKnown RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A9O60656 530 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 SPAG6O75602 509 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 EPN2O95208 641 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 GOT2P00505 430 aaKnown RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A6P19224 532 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A1P22309 533 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A4P22310 534 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 KELP23276 732 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 HTR1BP28222 390 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A3P35503 534 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A5P35504 534 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 PPARGP37231 505 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 NBL1P41271 181 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 KIAA1024LP59773 190 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 PTK2BQ14289 1009 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 CRYMQ14894 314 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 FASTKD3Q14CZ7 662 aaKnown RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TEAD4Q15561 434 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 DUOXA1Q1HG43 343 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 FASTKD1Q53R41 847 aaKnown RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 LDLRAP1Q5SW96 308 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 MRNIPQ6NTE8 343 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 NEPROQ6NW34 567 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 ZNF449Q6P9G9 518 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UNC5AQ6ZN44 842 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 C3orf62Q6ZUJ4 267 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 SDCCAG8Q86SQ7 713 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 PELI3Q8N2H9 469 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 SUMF1Q8NBK3 374 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 CALML6Q8TD86 181 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 PIGKQ92643 395 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 COX14Q96I36 57 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 SLC6A18Q96N87 628 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TTC25Q96NG3 672 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TCF12Q99081 682 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 WDR83Q9BRX9 315 aaKnown RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 PARD6BQ9BYG5 372 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 WDR26Q9H7D7 661 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A7Q9HAW7 530 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A10Q9HAW8 530 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 UGT1A8Q9HAW9 530 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TRIM39Q9HCM9 518 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 MOCS1Q9NZB8 636 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 RAB21Q9UL25 225 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 FNDC3AQ9Y2H6 1198 aaKnown RBP12.08□□□□□ -0.48
DNMT1-218ENST00000589294 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
DNMT1-218ENST00000589294 SPAG17Q6Q759 2223 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 SDK1Q7Z5N4 2213 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 DMDP11532 3685 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 FADS2P1A8MWK0 482 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 TNFRSF10CO14798 259 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 PFDN6O15212 129 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 SLC25A14O95258 325 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 RETP07949 1114 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 THEGLP0DJG4 465 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 MYCLP1P12525 358 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 ARNTP27540 789 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 THOP1P52888 689 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 VSNL1P62760 191 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 CDK3Q00526 305 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 ZRANB3Q5FWF4 1079 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 TRMT10CQ7L0Y3 403 aaKnown RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 TAS2R42Q7RTR8 314 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 HEATR4Q86WZ0 1026 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 NXPE1Q8N323 547 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 GSDMBQ8TAX9 411 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 FUBP1Q96AE4 644 aaKnown RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 C9orf72Q96LT7 481 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 MYOCQ99972 504 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 TRIM56Q9BRZ2 755 aaKnown RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 PLAC1Q9HBJ0 212 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 LRRC4CQ9HCJ2 640 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 GPR27Q9NS67 375 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 CATSPERZQ9NTU4 200 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 C20orf96Q9NUD7 363 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 TMPRSS11EQ9UL52 423 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 SMG5Q9UPR3 1016 aaKnown RBP12.07□□□□□ -0.48
DNMT1-218ENST00000589294 CA5BQ9Y2D0 317 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 OR1A2Q9Y585 309 aa12.07□□□□□ -0.48
DNMT1-218ENST00000589294 SLCO1B1Q9Y6L6 691 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms