RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CDKN2DP55273 166 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 IRX4P78413 519 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 PTSQ03393 145 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF460Q14592 562 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 CHI3L2Q15782 390 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 C9orf64Q5T6V5 341 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 PTCRAQ6ISU1 281 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 FAM151BQ6UXP7 276 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 DPPA4Q7L190 304 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 TAS2R42Q7RTR8 314 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 DSG4Q86SJ6 1040 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 RAVER1Q8IY67 606 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 PPP1R14CQ8TAE6 165 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 DTX3LQ8TDB6 740 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 CHFRQ96EP1 664 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 PPP1R16AQ96I34 528 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 C7orf26Q96N11 449 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 GPR78Q96P69 363 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 MRPL57Q9BQC6 102 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 CDH19Q9H159 772 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 MRPL46Q9H2W6 279 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 ASB8Q9H765 288 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 SLCO1B3Q9NPD5 702 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 PKD2L2Q9NZM6 624 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 NFKBIL1Q9UBC1 381 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 SUN2Q9UH99 717 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 RUVBL2Q9Y230 463 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 TICRRQ7Z2Z1 1910 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 RGSL1A5PLK6 1076 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 C16orf96A6NNT2 1141 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 AGAP14A8MT82 685 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 G3V2L1 256 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 PRMT5O14744 637 aaPredicted RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 GFRA3O60609 400 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 SNNO75324 88 aaPredicted RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 VPS26AO75436 327 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 TGDSO95455 350 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 SERPINE1P05121 402 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 PYGLP06737 847 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 RBP1P09455 135 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 C1SP09871 688 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 TROVE2P10155 538 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 MYL2P10916 166 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 HNRNPLP14866 589 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 TIMP2P16035 220 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF7P17097 686 aaPredicted RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ITGB7P26010 798 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 GMPRP36959 345 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 SPINT3P49223 89 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 CDKN1CP49918 316 aaPredicted RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 DCDC1P59894 354 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 BST1Q10588 318 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 PDAP1Q13442 181 aaKnown RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ITGA9Q13797 1035 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ACAP2Q15057 778 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ERAP2Q6P179 960 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ZYG11AQ6WRX3 759 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 RBFAQ8N0V3 343 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 FSTL5Q8N475 847 aaPredicted RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF366Q8N895 744 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 PNPLA1Q8N8W4 532 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 CSGALNACT1Q8TDX6 532 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 KCNJ9Q92806 393 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 ULK4Q96C45 1275 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 NXNL1Q96CM4 212 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 SCYL1Q96KG9 808 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 BIRC8Q96P09 236 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 RPP25Q9BUL9 199 aaKnown RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 P2RY12Q9H244 342 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 MTG2Q9H4K7 406 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 SYTL2Q9HCH5 934 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 PCDH12Q9NPG4 1184 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 IGSF5Q9NSI5 407 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 PPM1HQ9ULR3 514 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 FNDC3AQ9Y2H6 1198 aaKnown RBP11.99□□□□□ -0.49
CCBE1-203ENST00000589116 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
CCBE1-203ENST00000589116 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 TARM1B6A8C7 271 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 H3BMM5 538 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 PSMD11O00231 422 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 RHOBTB1O94844 696 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 CCDC166P0CW27 439 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 FGF3P11487 239 aaPredicted RBP11.98□□□□□ -0.49
CCBE1-203ENST00000589116 HLA-EP13747 358 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF37AP17032 561 aaPredicted RBP11.98□□□□□ -0.49
CCBE1-203ENST00000589116 KCNA4P22459 653 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 ACRV1P26436 265 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 FMO4P31512 558 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 MMP12P39900 470 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 TNFRSF4P43489 277 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 TIAL1Q01085 375 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCBE1-203ENST00000589116 OCRLQ01968 901 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 ASPHQ12797 758 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 DLG1Q12959 904 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 STX3Q13277 289 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 ENPP2Q13822 863 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 CSHL1Q14406 222 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 TECRLQ5HYJ1 363 aa11.98□□□□□ -0.49
CCBE1-203ENST00000589116 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms