RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SNX19Q92543 992 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 SCAMP4Q969E2 229 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 SKA1Q96BD8 255 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 HSPA12BQ96MM6 686 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 CYTH2Q99418 400 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 KLF6Q99612 283 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 SEMA4AQ9H3S1 761 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 WDR26Q9H7D7 661 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 PPCSQ9HAB8 311 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 ZFATQ9P243 1243 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 INVSQ9Y283 1065 aa16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 FNDC3AQ9Y2H6 1198 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-211ENST00000588907 UQCRHLA0A096LP55 91 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 TRBV5-4A0A0C4DH59 114 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 GPR89AB7ZAQ6 455 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 GAPDHSO14556 408 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 PCCBP05166 539 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 UQCRHP07919 91 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 GPR89BP0CG08 455 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 RALBP11234 206 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 KELP23276 732 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 PMLP29590 882 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 FOXN2P32314 431 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 HOXD12P35452 270 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 TRIM23P36406 574 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 RABIFP47224 123 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 GPX6P59796 221 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 RACK1P63244 317 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 ITIH4Q14624 930 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 LYSMD4Q5XG99 296 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 KYAT3Q6YP21 454 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 RABEPKQ7Z6M1 372 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 IQCHQ86VS3 1027 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 SLC26A11Q86WA9 606 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 BTN2A2Q8WVV5 523 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 UBLCP1Q8WVY7 318 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 GLYATL1Q969I3 302 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 SERAC1Q96JX3 654 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 CCDC77Q9BR77 488 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 LRFN3Q9BTN0 628 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 SUDS3Q9H7L9 328 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 PHPT1Q9NRX4 125 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 INTS10Q9NVR2 710 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 TXNDC16Q9P2K2 825 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 SUSD2Q9UGT4 822 aa16.85■□□□□ 0.29
SCAMP4-211ENST00000588907 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 A6NNZ2 444 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 PRR5-ARHGAP8B1AHC4 643 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 CFAP99D6REC4 459 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 CACNB4O00305 520 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 GNSP15586 552 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 ACRV1P26436 265 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 TYSND1Q2T9J0 566 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 PLK5Q496M5 336 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 ATP13A5Q4VNC0 1218 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 HSP90AA5PQ58FG0 334 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 ZNF470Q6ECI4 717 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 CAPN12Q6ZSI9 719 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 RFLNAQ6ZTI6 216 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 PTAR1Q7Z6K3 402 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 ABI3BPQ7Z7G0 1075 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 DCP2Q8IU60 420 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 CILP2Q8IUL8 1156 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 TMEFF1Q8IYR6 380 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 NXPE1Q8N323 547 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 DDHD1Q8NEL9 900 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 KLK6Q92876 244 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 HIC2Q96JB3 615 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 TRIM56Q9BRZ2 755 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 TEX101Q9BY14 249 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 ACSS3Q9H6R3 686 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 PLAC1Q9HBJ0 212 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 ARFGAP3Q9NP61 516 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 FETUBQ9UGM5 382 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 CEP192Q8TEP8 1941 aa16.84■□□□□ 0.29
SCAMP4-211ENST00000588907 FAM159BA6NKW6 160 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 QSOX1O00391 747 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 CCL22O00626 93 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 HRO43593 1189 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 SOD1P00441 154 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 IVLP07476 585 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 ERVK-10P10266 1014 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 MYCLP1P12525 358 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 HTR1BP28222 390 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 IGFALSP35858 605 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 KIAA1024LP59773 190 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 CDK3Q00526 305 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 SIM2Q14190 667 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 PTK2BQ14289 1009 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 INPP5AQ14642 412 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 PACS1Q6VY07 963 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 TAS2R42Q7RTR8 314 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 HEATR4Q86WZ0 1026 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 LRRC6Q86X45 466 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC41A1Q8IVJ1 513 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 RBFAQ8N0V3 343 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 FBF1Q8TES7 1133 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 DCUN1D1Q96GG9 259 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 LOXL4Q96JB6 756 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms