RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ALS2CLQ60I27 953 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 AFTPHQ6ULP2 937 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 FAM151BQ6UXP7 276 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 PRR23CQ6ZRP0 262 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 RFLNAQ6ZTI6 216 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 CENPUQ71F23 418 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 ZNF534Q76KX8 674 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 SNX20Q7Z614 316 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 SDCCAG8Q86SQ7 713 aaPredicted RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 TMEM135Q86UB9 458 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 LMNTD2Q8IXW0 634 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 IFT20Q8IY31 132 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 EIF1ADQ8N9N8 165 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 OR6P1Q8NGX9 317 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 OR4L1Q8NH43 312 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 STAMBPL1Q96FJ0 436 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 SCARF2Q96GP6 870 aaPredicted RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 ZNF514Q96K75 400 aaPredicted RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 DNAJC1Q96KC8 554 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 SIGLEC10Q96LC7 697 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 TCF12Q99081 682 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 EBNA1BP2Q99848 306 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 SLC13A1Q9BZW2 595 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 GAREM1Q9H706 876 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 ASB8Q9H765 288 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 EPB41L5Q9HCM4 733 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 TMEM9BQ9NQ34 198 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 PIH1D1Q9NWS0 290 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 MTRF1LQ9UGC7 380 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 RAPGEFL1Q9UHV5 662 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 CNOT6Q9ULM6 557 aaKnown RBP9□□□□□ -0.97
CIRBP-218ENST00000588344 SLC17A4Q9Y2C5 497 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 SNX11Q9Y5W9 270 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 MAD1L1Q9Y6D9 718 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 DGKBQ9Y6T7 804 aa9□□□□□ -0.97
CIRBP-218ENST00000588344 A0A1B0GTQ1 180 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 LNP1A1A4G5 178 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 FADS2P1A8MWK0 482 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PATE3B3GLJ2 98 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 K7ESM1 405 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 QSOX1O00391 747 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 BUD23O43709 281 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PCDHGA12O60330 932 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CDK14O94921 469 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 ASMTLO95671 621 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 IVLP07476 585 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GSTM1P09488 218 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CTSEP14091 401 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 NME1P15531 152 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PGAM1P18669 254 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 MC4RP32245 332 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PLA2G5P39877 138 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 HK3P52790 923 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 LIMK1P53667 647 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PLTPP55058 493 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SRP54P61011 504 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 TMPRSS15P98073 1019 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 XIAPP98170 497 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SLC7A5Q01650 507 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GUCY2DQ02846 1103 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GSTM4Q03013 218 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 TMEM115Q12893 351 aaPredicted RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 ILF2Q12905 390 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CUL1Q13616 776 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GTF2H3Q13889 308 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 FRG1Q14331 258 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CCDC6Q16204 474 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 AASDHQ4L235 1098 aaPredicted RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 ANKRD20A4Q4UJ75 823 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CCDC38Q502W7 563 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 FASTKD1Q53R41 847 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 KIAA0930Q6ICG6 404 aaPredicted RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 MRNIPQ6NTE8 343 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 LVRNQ6Q4G3 990 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SPATS2Q86XZ4 545 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SLC22A18ASQ8N1D0 253 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 MPP5Q8N3R9 675 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 FSTL5Q8N475 847 aaPredicted RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 NOA1Q8NC60 698 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 DDHD1Q8NEL9 900 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 OR13C4Q8NGS5 318 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 OR13J1Q8NGT2 312 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GDAP1Q8TB36 358 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 CALML6Q8TD86 181 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.99□□□□□ -0.974e-6■■■■□ 24.2
CIRBP-218ENST00000588344 HDAC10Q969S8 669 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 DCUN1D1Q96GG9 259 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 PHOX2BQ99453 314 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 AGAP2Q99490 1192 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 COPS8Q99627 209 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 GTPBP2Q9BX10 602 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 DPH5Q9H2P9 285 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 TREX1Q9NSU2 369 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 TRNAU1APQ9NX07 287 aaKnown RBP8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SYBUQ9NX95 663 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 ZDHHC3Q9NYG2 299 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 SPASTQ9UBP0 616 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 KLQ9UEF7 1012 aa8.99□□□□□ -0.97
CIRBP-218ENST00000588344 FKBPLQ9UIM3 349 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms