RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TMEM139Q8IV31 216 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 FAM71AQ8IYT1 594 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 GALNT6Q8NCL4 622 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 SLC37A2Q8TED4 501 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 FAM172AQ8WUF8 416 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 CPA5Q8WXQ8 436 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 ECHDC3Q96DC8 303 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 STAMBPL1Q96FJ0 436 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 COQ10AQ96MF6 247 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 TEX101Q9BY14 249 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 HAUS4Q9H6D7 363 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 PDFQ9HBH1 243 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 AIPL1Q9NZN9 384 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 LUZP4Q9P127 313 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 B4GALT6Q9UBX8 382 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
SDF2-204ENST00000587338 EPN1Q9Y6I3 576 aaPredicted RBP8.51□□□□□ -1.05
SDF2-204ENST00000587338 TACC2O95359 2948 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 MTORP42345 2549 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 PIPSLA2A3N6 862 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 A6NCN8 305 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 TCP11X1B4DZS4 312 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 ZSCAN12O43309 604 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 CREB3O43889 395 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 CCDC175P0C221 793 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 CYP11B1P15538 503 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 ZNF28P17035 718 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 HNRNPH3P31942 346 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 ETV3P41162 512 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 FASLGP48023 281 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 HDAC4P56524 1084 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 POLR2LP62875 67 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 HHEXQ03014 270 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 INPP5JQ15735 1006 aaPredicted RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 CNGA3Q16281 694 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 MARK2Q7KZI7 788 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 STRADAQ7RTN6 431 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 IRF2BP2Q7Z5L9 587 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 SLFN11Q7Z7L1 901 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 KIAA1328Q86T90 577 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 CCDC170Q8IYT3 715 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 SFRP1Q8N474 314 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 ACRBPQ8NEB7 543 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 JOSD2Q8TAC2 188 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 FNIP1Q8TF40 1166 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 CELF6Q96J87 481 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 ELMO2Q96JJ3 720 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 CINPQ9BW66 212 aaPredicted RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 TRIM55Q9BYV6 548 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 SLC29A3Q9BZD2 475 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 ZNF106Q9H2Y7 1883 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 CATSPERBQ9H7T0 1116 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 SIDT1Q9NXL6 827 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 KCND3Q9UK17 655 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 SLC17A4Q9Y2C5 497 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 TMEM98Q9Y2Y6 226 aa8.5□□□□□ -1.05
SDF2-204ENST00000587338 BZW2Q9Y6E2 419 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 TNRC6AQ8NDV7 1962 aaKnown RBP8.5□□□□□ -1.05
SDF2-204ENST00000587338 C2CD4BA6NLJ0 364 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 TMCO5BA8MYB1 307 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 CCP110O43303 1012 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 PRAMEF11O60813 436 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 CREG1O75629 220 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 PALMO75781 387 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 KIAA0754O94854 1291 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 SORBS2O94875 1100 aaKnown RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 NDUFA10O95299 355 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 EML2O95834 649 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 LDLRP01130 860 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 MMEP08473 750 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 FECHP22830 423 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 PTPN9P43378 593 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 CSNK1DP48730 415 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 NOMO3P69849 1222 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 CHAF1BQ13112 559 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 SEMA5AQ13591 1074 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 DNASE1L3Q13609 305 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 C1QL3Q5VWW1 255 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 CPZQ66K79 652 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 HGSNATQ68CP4 663 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 ZNF571Q7Z3V5 609 aaPredicted RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 HSD11B1LQ7Z5J1 315 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 NOP9Q86U38 636 aaKnown RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 TRIM74Q86UV6 250 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 RASGRP3Q8IV61 690 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 APLFQ8IW19 511 aaPredicted RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 UMODL1-AS1Q8N2C9 162 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 PDCD6IPQ8WUM4 868 aaKnown RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 NTAN1Q96AB6 310 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 DTD2Q96FN9 168 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 TCTN2Q96GX1 697 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 SLC25A23Q9BV35 468 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 ZNF768Q9H5H4 540 aaKnown RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 STN1Q9H668 368 aaKnown RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 LNPEPQ9UIQ6 1025 aa8.49□□□□□ -1.05
SDF2-204ENST00000587338 ERRFI1Q9UJM3 462 aaPredicted RBP8.49□□□□□ -1.05
SDF2-204ENST00000587338 PPP2R2CQ9Y2T4 447 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms