RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 FAM83EQ2M2I3 478 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 NEK5Q6P3R8 708 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 ZDHHC13Q8IUH4 622 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 GALNT12Q8IXK2 581 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 ESX1Q8N693 406 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 LSMEM1Q8N8F7 131 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 CEP295NLQ96MC4 621 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 MBOAT4Q96T53 435 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 SEPHS2Q99611 448 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-207ENST00000586588 CCDC90BQ9GZT6 254 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 EPS8L2Q9H6S3 715 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 DDX28Q9NUL7 540 aaKnown RBP13.07□□□□□ -0.32
DNMT1-207ENST00000586588 USE1Q9NZ43 259 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 MFHAS1Q9Y4C4 1052 aa13.07□□□□□ -0.32
DNMT1-207ENST00000586588 OAS3Q9Y6K5 1087 aaKnown RBP13.07□□□□□ -0.32
DNMT1-207ENST00000586588 ZFC3H1O60293 1989 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 HAT1O14929 419 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 GAS2O43903 313 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 EGFRP00533 1210 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 AHSGP02765 367 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 AGXTP21549 392 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 RYKP34925 604 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 ARL4AP40617 200 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 DEFA1P59665 94 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 DEFA3P59666 94 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 NCS1P62166 190 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 IL18R1Q13478 541 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 NPTX1Q15818 432 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 ZNF404Q494X3 552 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 GDPD3Q7L5L3 318 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 PID1Q7Z2X4 250 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 NT5DC4Q86YG4 428 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 PLD3Q8IV08 490 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 FBLIM1Q8WUP2 373 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 C19orf60Q96EN9 201 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 AMBRA1Q9C0C7 1298 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 C12orf10Q9HB07 376 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 WBP11Q9Y2W2 641 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 CCDC154A6NI56 674 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 B8ZZF3 427 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 PTGES3LE9PB15 166 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 MFSD11O43934 449 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 CNTN5O94779 1100 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 SNX4O95219 450 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 MT-ND1P03886 318 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 NCK1P16333 377 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 TUFMP49411 452 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 OLIG2Q13516 323 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 POU6F1Q14863 301 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 ACAP2Q15057 778 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
DNMT1-207ENST00000586588 SNAP47Q5SQN1 464 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 CEP97Q8IW35 865 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 CCDC28AQ8IWP9 274 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 SDCCAG3Q96C92 435 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 RUBCNLQ9H714 662 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 SLC52A3Q9NQ40 469 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 SEPT10Q9P0V9 454 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 KCNN3Q9UGI6 736 aa13.06□□□□□ -0.32
DNMT1-207ENST00000586588 COL2A1P02458 1487 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-207ENST00000586588 USP12O75317 370 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 APOA1P02647 267 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 MYCLP1P12525 358 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-207ENST00000586588 CYP3A5P20815 502 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 PGGT1BP53609 377 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 KCTD11Q693B1 232 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 RBM23Q86U06 439 aaKnown RBP13.05□□□□□ -0.32
DNMT1-207ENST00000586588 IFNEQ86WN2 208 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 CNTN4Q8IWV2 1026 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 UBQLNLQ8IYU4 475 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 NAT16Q8N8M0 369 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 NLGN2Q8NFZ4 835 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 HEXDCQ8WVB3 486 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 NEMP2A6NFY4 417 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 CLDN24A6NM45 220 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 A8MT66 165 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 G3V2T6 193 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 CDK2AP1O14519 115 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 ZW10O43264 779 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 PFKMP08237 780 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 RAP2AP10114 183 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 GOT1P17174 413 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 UGT2B10P36537 528 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 OR2B6P58173 313 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 PPP2R2BQ00005 443 aa13.05□□□□□ -0.32
DNMT1-207ENST00000586588 PRKCDQ05655 676 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms