RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 CSF3RQ99062 836 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 MXD3Q9BW11 206 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 WDR12Q9GZL7 423 aaKnown RBP2.84□□□□□ -1.95
VAPA-208ENST00000584796 ZNF696Q9H7X3 374 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 FBRSL1Q9HCM7 1045 aaKnown RBP2.84□□□□□ -1.95
VAPA-208ENST00000584796 PTPRHQ9HD43 1115 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 NOX4Q9NPH5 578 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 GGA3Q9NZ52 723 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 SLC9A2Q9UBY0 812 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 VDAC3Q9Y277 283 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 ZNF711Q9Y462 761 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 USP16Q9Y5T5 823 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 SNX9Q9Y5X1 595 aa2.84□□□□□ -1.95
VAPA-208ENST00000584796 MAST2Q6P0Q8 1798 aa2.84□□□□□ -1.96
VAPA-208ENST00000584796 SPTBN4Q9H254 2564 aa2.84□□□□□ -1.96
VAPA-208ENST00000584796 CHD7Q9P2D1 2997 aa2.84□□□□□ -1.96
VAPA-208ENST00000584796 PHIPQ8WWQ0 1821 aa2.84□□□□□ -1.96
VAPA-208ENST00000584796 XIRP2A4UGR9 3374 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 E7EVH7 732 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 PSMD14O00487 310 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 EBAG9O00559 213 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 SLC25A17O43808 307 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 SH3BP5O60239 455 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 TIPRLO75663 272 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 MYL1P05976 194 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 CETPP11597 493 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 FGF5P12034 268 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 GPTP24298 496 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 TNFAIP2Q03169 654 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 PRKG1Q13976 671 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 BRD3Q15059 726 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 PUM3Q15397 648 aaKnown RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 AMZ1Q400G9 498 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 ATP13A5Q4VNC0 1218 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 HSP90AB4PQ58FF6 505 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 ZNF484Q5JVG2 852 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 SH2D4BQ5SQS7 431 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 SUSD4Q5VX71 490 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 FAM122CQ6P4D5 195 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 MYPOPQ86VE0 399 aaPredicted RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 IL17REQ8NFR9 667 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 OR6Y1Q8NGX8 325 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 TTC14Q96N46 770 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 ELAC2Q9BQ52 826 aaKnown RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 TRMT61BQ9BVS5 477 aaKnown RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 NPLQ9BXD5 320 aaPredicted RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 CTDSP1Q9GZU7 261 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 ZNF700Q9H0M5 742 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 DBNDD1Q9H9R9 158 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 LRRC4Q9HBW1 653 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 TLR8Q9NR97 1041 aaKnown RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 DACT1Q9NYF0 836 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 IFT80Q9P2H3 777 aaPredicted RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 NDRG3Q9UGV2 375 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 CNOT7Q9UIV1 285 aaKnown RBP2.83□□□□□ -1.96
VAPA-208ENST00000584796 CD207Q9UJ71 328 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 CNPY2Q9Y2B0 182 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 TRIM17Q9Y577 477 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 ABCC4O15439 1325 aa2.83□□□□□ -1.96
VAPA-208ENST00000584796 A0A0G2JPF8 293 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 A0A1B0GU03 582 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 A0A1W2PS18 150 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 HNRNPCL3B7ZW38 293 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 C16orf97H3BN30 126 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 MID1O15344 667 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 HNRNPCL1O60812 293 aaKnown RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 RFPL2O75678 378 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 ATP1A1P05023 1023 aaKnown RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 HNRNPCL4P0DMR1 293 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 TFPIP10646 304 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 SRCP12931 536 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 TNNT1P13805 278 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 PAX3P23760 479 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 CST5P28325 142 aaPredicted RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 RYKP34925 604 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 PIGAP37287 484 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 CLCN3P51790 818 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 RBM5P52756 815 aaKnown RBP eCLIP2.82□□□□□ -1.96
VAPA-208ENST00000584796 FOXO1Q12778 655 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 EFNB3Q15768 340 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 FBXO43Q4G163 708 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 PPP6R3Q5H9R7 873 aaPredicted RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 C1orf141Q5JVX7 400 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 NAPEPLDQ6IQ20 393 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 EPHX4Q8IUS5 362 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 GHDCQ8N2G8 530 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 SPEM1Q8N4L4 309 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 ZNF485Q8NCK3 441 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 CREB3L4Q8TEY5 395 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 OTULINQ96BN8 352 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 ZNF501Q96CX3 271 aaPredicted RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 TMEM19Q96HH6 336 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 MPHOSPH6Q99547 160 aaKnown RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 RBM4Q9BWF3 364 aaKnown RBP2.82□□□□□ -1.96
VAPA-208ENST00000584796 ENTPD7Q9NQZ7 604 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 KLHL1Q9NR64 748 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 CYSLTR2Q9NS75 346 aa2.82□□□□□ -1.96
VAPA-208ENST00000584796 NIP7Q9Y221 180 aaKnown RBP eCLIP2.82□□□□□ -1.96
VAPA-208ENST00000584796 LRCH1Q9Y2L9 728 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms