RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 B4GALNT4Q76KP1 1039 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 HSD11B1LQ7Z5J1 315 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 TSPAN33Q86UF1 283 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 CCNYQ8ND76 341 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 RCBTB1Q8NDN9 531 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 SGF29Q96ES7 293 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 DTD2Q96FN9 168 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 HERPUD2Q9BSE4 406 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 SEPT3Q9UH03 358 aa15.61■□□□□ 0.09
SKA2-209ENST00000583976 GOLGA6CA6NDK9 693 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 GOLGA6BA6NDN3 693 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 TMX2-CTNND1H3BSU7 103 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 TNFRSF10CO14798 259 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 NVLO15381 856 aaKnown RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 B4GAT1O43505 415 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 NUDT21O43809 227 aaKnown RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 HEXIM1O94992 359 aaKnown RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 GOLGA6DP0CG33 693 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 CCL4P13236 92 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 CCNB1P14635 433 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 PECAM1P16284 738 aaPredicted RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 CR2P20023 1033 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 VIPR1P32241 457 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 CETN2P41208 172 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 GARSP41250 739 aaKnown RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 POLD2P49005 469 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 ARSDP51689 593 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 COPS2P61201 443 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 CDK3Q00526 305 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 GALNT2Q10471 571 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 RFTN1Q14699 578 aaPredicted RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 PPP2R5EQ16537 467 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 ZNF569Q5MCW4 686 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 CCDC181Q5TID7 509 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 DOK6Q6PKX4 331 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 SLC30A9Q6PML9 568 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 ZNF438Q7Z4V0 828 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 TRIM74Q86UV6 250 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 ZDHHC1Q8WTX9 485 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 CCDC74BQ96LY2 380 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 FRMD8Q9BZ67 464 aaPredicted RBP15.6■□□□□ 0.09
SKA2-209ENST00000583976 OSBPL8Q9BZF1 889 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 GOLGA6AQ9NYA3 693 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 TAAR2Q9P1P5 351 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 SUFUQ9UMX1 484 aa15.6■□□□□ 0.09
SKA2-209ENST00000583976 COL12A1Q99715 3063 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 HTRA2O43464 458 aaPredicted RBP15.59■□□□□ 0.09
SKA2-209ENST00000583976 ECEL1O95672 775 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 CEACAM5P06731 702 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 HOXC4P09017 264 aaPredicted RBP15.59■□□□□ 0.09
SKA2-209ENST00000583976 PNLIPP16233 465 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 CTPS1P17812 591 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 MX2P20592 715 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 MANEAQ5SRI9 462 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 FAM182AQ5T1J6 154 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 RAET1GQ6H3X3 334 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 ZNF574Q6ZN55 896 aaPredicted RBP15.59■□□□□ 0.09
SKA2-209ENST00000583976 C17orf82Q86X59 251 aaPredicted RBP15.59■□□□□ 0.09
SKA2-209ENST00000583976 GPBAR1Q8TDU6 330 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 NSMCE1Q8WV22 266 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 P3H4Q92791 437 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 CMKLR1Q99788 373 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 MGME1Q9BQP7 344 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 TEX101Q9BY14 249 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 CLMPQ9H6B4 373 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 NOD2Q9HC29 1040 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 PHPT1Q9NRX4 125 aaPredicted RBP15.59■□□□□ 0.09
SKA2-209ENST00000583976 TMEM9Q9P0T7 183 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 CD84Q9UIB8 345 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 PLEKHM1Q9Y4G2 1056 aa15.59■□□□□ 0.09
SKA2-209ENST00000583976 UBR5O95071 2799 aaPredicted RBP15.58■□□□□ 0.09
SKA2-209ENST00000583976 KIF5CO60282 957 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 SOCS5O75159 536 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 CPNE6O95741 557 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 SOD1P00441 154 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 FGF1P05230 155 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 ALDH4A1P30038 563 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 NSUN2Q08J23 767 aaKnown RBP eCLIP15.58■□□□□ 0.08
SKA2-209ENST00000583976 AP1B1Q10567 949 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 ILF3Q12906 894 aaKnown RBP eCLIP15.58■□□□□ 0.082e-15■■■■□ 22.5
SKA2-209ENST00000583976 NKAIN2Q5VXU1 208 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 Q6ZVL8 140 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 BBS12Q6ZW61 710 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 ZNF761Q86XN6 746 aaPredicted RBP15.58■□□□□ 0.08
SKA2-209ENST00000583976 DTX1Q86Y01 620 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 LRRC49Q8IUZ0 686 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 SLC35F6Q8N357 371 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
SKA2-209ENST00000583976 COL26A1Q96A83 441 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 ZNF599Q96NL3 588 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 NUDCD1Q96RS6 583 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 FAM118BQ9BPY3 351 aa15.58■□□□□ 0.08
SKA2-209ENST00000583976 ZFC3H1O60293 1989 aaKnown RBP15.58■□□□□ 0.08
SKA2-209ENST00000583976 PTPN13Q12923 2485 aa15.57■□□□□ 0.08
SKA2-209ENST00000583976 IGHV5-10-1A0A0J9YXX1 117 aa15.57■□□□□ 0.08
SKA2-209ENST00000583976 RHPN2P1A8MT19 583 aa15.57■□□□□ 0.08
SKA2-209ENST00000583976 KCNK1O00180 336 aa15.57■□□□□ 0.08
SKA2-209ENST00000583976 MATN3O15232 486 aa15.57■□□□□ 0.08
SKA2-209ENST00000583976 TJP3O95049 919 aa15.57■□□□□ 0.08
SKA2-209ENST00000583976 ITGB6P18564 788 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms