RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 IGHV5-10-1A0A0J9YXX1 117 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 STMND1H3BQB6 276 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 FGF1P05230 155 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 MYCLP1P12525 358 aaPredicted RBP20.42■□□□□ 0.86
SRSF1-206ENST00000583741 ALDH4A1P30038 563 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 HTR7P34969 479 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 NR1D2Q14995 579 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 ACOX1Q15067 660 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 COLEC12Q5KU26 742 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 TMEM164Q5U3C3 297 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 PSTKQ8IV42 348 aaKnown RBP20.42■□□□□ 0.86
SRSF1-206ENST00000583741 ACTRT1Q8TDG2 376 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 ZDHHC1Q8WTX9 485 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 PATE1Q8WXA2 126 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 RAPGEF5Q92565 580 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 COQ10AQ96MF6 247 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 SLC12A9Q9BXP2 914 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 SLC25A18Q9H1K4 315 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 B4GALT6Q9UBX8 382 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 TTC7AQ9ULT0 858 aaPredicted RBP20.42■□□□□ 0.86
SRSF1-206ENST00000583741 ST14Q9Y5Y6 855 aa20.42■□□□□ 0.86
SRSF1-206ENST00000583741 ARHGAP42A6NI28 874 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 HGSO14964 777 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-206ENST00000583741 CEACAM5P06731 702 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 FGF3P11487 239 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-206ENST00000583741 KDELR1P24390 212 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 AK4P27144 223 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-206ENST00000583741 CD1CP29017 333 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 CDH6P55285 790 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 COPS2P61201 443 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 TLE1Q04724 770 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 MFSD7Q6UXD7 560 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 NPWQ8N729 165 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 PAF1Q8N7H5 531 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 NKD1Q969G9 470 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 CCDC74BQ96LY2 380 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 SMARCAL1Q9NZC9 954 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 AKAP7Q9P0M2 348 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-206ENST00000583741 TAAR2Q9P1P5 351 aa20.41■□□□□ 0.86
SRSF1-206ENST00000583741 TTC24A2A3L6 582 aaPredicted RBP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 RHPN2P1A8MT19 583 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 PDE2AO00408 941 aaPredicted RBP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 EEF2KO00418 725 aaKnown RBP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 ECEL1O95672 775 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 FGGP02679 453 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 SCNN1BP51168 640 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 POLR2LP62875 67 aaKnown RBP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 NSUN2Q08J23 767 aaKnown RBP eCLIP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 KRT81Q14533 505 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 PDK2Q15119 407 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 SPOCD1Q6ZMY3 1216 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 HEATR4Q86WZ0 1026 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 MAP7D3Q8IWC1 876 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 CEP112Q8N8E3 955 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 NUS1Q96E22 293 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 NAP1L3Q99457 506 aaPredicted RBP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 DHX35Q9H5Z1 703 aaKnown RBP20.4■□□□□ 0.86
SRSF1-206ENST00000583741 SP110Q9HB58 689 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 DONSONQ9NYP3 566 aa20.4■□□□□ 0.86
SRSF1-206ENST00000583741 C3orf70A6NLC5 250 aaPredicted RBP20.39■□□□□ 0.85
SRSF1-206ENST00000583741 DFFAO00273 331 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 PTPN7P35236 360 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 ILF3Q12906 894 aaKnown RBP eCLIP20.39■□□□□ 0.85
SRSF1-206ENST00000583741 CNGA3Q16281 694 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 DPYSL2Q16555 572 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 LONRF2Q1L5Z9 754 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 TFDP3Q5H9I0 405 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 PPP6R3Q5H9R7 873 aaPredicted RBP20.39■□□□□ 0.85
SRSF1-206ENST00000583741 NKAIN2Q5VXU1 208 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 SLC30A9Q6PML9 568 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 SLC13A5Q86YT5 568 aaPredicted RBP20.39■□□□□ 0.85
SRSF1-206ENST00000583741 TP53INP2Q8IXH6 220 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 MNS1Q8NEH6 495 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 TAAR9Q96RI9 348 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 KCTD15Q96SI1 283 aaPredicted RBP20.39■□□□□ 0.85
SRSF1-206ENST00000583741 CARD6Q9BX69 1037 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 TEX101Q9BY14 249 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 GSDMCQ9BYG8 508 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 FRMD8Q9BZ67 464 aaPredicted RBP20.39■□□□□ 0.85
SRSF1-206ENST00000583741 OSBPL8Q9BZF1 889 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 SUFUQ9UMX1 484 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 PCDHGA3Q9Y5H0 932 aa20.39■□□□□ 0.85
SRSF1-206ENST00000583741 CD48P09326 243 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 CSF2RBP32927 897 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 CDKN2BP42772 138 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 GNPDA1P46926 289 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 ARSEP51690 589 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 LIMK2P53671 638 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 AP1S1P61966 158 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 DPYSL3Q14195 570 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 LLGL1Q15334 1064 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 PPP2R5EQ16537 467 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 RFX8Q6ZV50 586 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 NAGSQ8N159 534 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 FAM71BQ8TC56 605 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 PSKH2Q96QS6 385 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 PCDH18Q9HCL0 1135 aa20.38■□□□□ 0.85
SRSF1-206ENST00000583741 PHPT1Q9NRX4 125 aaPredicted RBP20.38■□□□□ 0.85
SRSF1-206ENST00000583741 TRNAU1APQ9NX07 287 aaKnown RBP20.38■□□□□ 0.85
SRSF1-206ENST00000583741 B3GALT1Q9Y5Z6 326 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms