RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 NFU1Q9UMS0 254 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DRG1Q9Y295 367 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 R3HDM2Q9Y2K5 976 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NEU2Q9Y3R4 380 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RNF215Q9Y6U7 377 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ANKRD36A6QL64 1941 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SCN8AQ9UQD0 1980 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 hCG_1818297A0A087WSY0 165 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PRAMEF33A0A0G2JMD5 474 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AGRPO00253 132 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 EEF2KO00418 725 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DAPK3O43293 454 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NUDT21O43809 227 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PRAMEF10O60809 474 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KRT1P04264 644 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SFTPCP11686 197 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CD82P27701 267 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CETN2P41208 172 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RGRP47804 291 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PAPOLAP51003 745 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 POLR2LP62875 67 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SRSF6Q13247 344 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HLTFQ14527 1009 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RFTN1Q14699 578 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 BOLA3Q53S33 107 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PHF19Q5T6S3 580 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TMEM164Q5U3C3 297 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AFMIDQ63HM1 303 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DRICH1Q6PGQ1 229 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CCDC137Q6PK04 289 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LIPIQ6XZB0 460 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZFAND4Q86XD8 727 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SLITRK4Q8IW52 837 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 MREGQ8N565 214 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 EXTL1Q92935 676 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 USP7Q93009 1102 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ECHDC3Q96DC8 303 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PEBP4Q96S96 227 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TMEM168Q9H0V1 697 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DHX35Q9H5Z1 703 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 WDR26Q9H7D7 661 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM114A2Q9NRY5 505 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZDHHC18Q9NUE0 388 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GPATCH2LQ9NWQ4 482 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AP4E1Q9UPM8 1137 aa9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 UTP11Q9Y3A2 253 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HELZ2Q9BYK8 2649 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PRSS38A1L453 326 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RHPN2P1A8MT19 583 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DFFAO00273 331 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZW10O43264 779 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RNF8O76064 485 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TJP3O95049 919 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CPNE6O95741 557 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IL4RP24394 825 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IVDP26440 423 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TRIM23P36406 574 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ETV5P41161 510 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CSRP3P50461 194 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RENBPP51606 427 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AP1S1P61966 158 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IL10RBQ08334 325 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 NSUN2Q08J23 767 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ACOX1Q15067 660 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CLPPQ16740 277 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KCTD19Q17RG1 926 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PNCKQ6P2M8 343 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZDHHC24Q6UX98 284 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SYDE1Q6ZW31 735 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 VASH2Q86V25 355 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PIM3Q86V86 326 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SFTPA2Q8IWL1 248 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 IQCKQ8N0W5 287 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CCL4L1Q8NHW4 92 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZNF462Q96JM2 2506 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TRIM51Q9BSJ1 452 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LGR4Q9BXB1 951 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GSDMCQ9BYG8 508 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TXLNGYQ9BZA5 131 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 B3GNT4Q9C0J1 378 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RAB17Q9H0T7 212 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZWILCHQ9H900 591 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CARS2Q9HA77 564 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PHPT1Q9NRX4 125 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KCTD5Q9NXV2 234 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FOXJ2Q9P0K8 574 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PCSK1NQ9UHG2 260 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FEZ2Q9UHY8 353 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SNX24Q9Y343 169 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-227ENST00000583352 UNC13CQ8NB66 2214 aa9.68□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-227ENST00000583352 A0A1W2PQ67 120 aa9.68□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LRRD1A4D1F6 860 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms