RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 SLC35E4Q6ICL7 350 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 ARHGAP11AQ6P4F7 1023 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 SLC27A1Q6PCB7 646 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 CEACAM20Q6UY09 585 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 NRROSQ86YC3 692 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 MAP7D3Q8IWC1 876 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 SRBD1Q8N5C6 995 aaKnown RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 CNBD1Q8NA66 436 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 OR52I2Q8NH67 350 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 THAP6Q8TBB0 222 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 TAS1R2Q8TE23 839 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 SLC38A5Q8WUX1 472 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 APBB2Q92870 758 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 GTF3C6Q969F1 213 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 TAAR8Q969N4 342 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 SAAL1Q96ER3 474 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 LINGO1Q96FE5 620 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 PPP1R13BQ96KQ4 1090 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 ZNF354BQ96LW1 612 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 ACOX2Q99424 681 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 LITAFQ99732 161 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 SLC25A18Q9H1K4 315 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 MAP3K20Q9NYL2 800 aaKnown RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 POLG2Q9UHN1 485 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 FBXL2Q9UKC9 423 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 ACSL5Q9ULC5 683 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 CYP46A1Q9Y6A2 500 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 FAM237AA0A1B0GTK4 181 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ZCWPW2A0A1B0GU75 182 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 TNFSF14O43557 240 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 SYNGR3O43761 229 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 IGHV4-39P01824 125 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 TUBBP07437 444 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ABCD3P28288 659 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 PIP4K2AP48426 406 aaPredicted RBP3.83□□□□□ -1.8
COPS3-217ENST00000583160 CLDN20P56880 219 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 TUBB4BP68371 445 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 FCN2Q15485 313 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ARHGAP17Q68EM7 881 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ZNF704Q6ZNC4 412 aaPredicted RBP3.83□□□□□ -1.8
COPS3-217ENST00000583160 DPPA4Q7L190 304 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 DGLUCYQ7Z3D6 616 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ZNF354CQ86Y25 554 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 NFKBIDQ8NI38 313 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ST8SIA4Q92187 359 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 IGSF8Q969P0 613 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 HARBI1Q96MB7 349 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 GFRA4Q9GZZ7 299 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 USP44Q9H0E7 712 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 LTB4R2Q9NPC1 389 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 PCDHB16Q9NRJ7 776 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 LUZP4Q9P127 313 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 INTS6Q9UL03 887 aaKnown RBP3.83□□□□□ -1.8
COPS3-217ENST00000583160 CAMK2AQ9UQM7 478 aa3.83□□□□□ -1.8
COPS3-217ENST00000583160 ANTXRLA6NF34 631 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 EIF3DO15371 548 aaKnown RBP eCLIP3.82□□□□□ -1.8
COPS3-217ENST00000583160 NCAM2O15394 837 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 PYGLP06737 847 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 IL7RP16871 459 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 ZNF182P17025 639 aaPredicted RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 ALDH4A1P30038 563 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 HOXC9P31274 260 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 DCTP40126 519 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 ARCN1P48444 511 aaKnown RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 EIF3BP55884 814 aaKnown RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 COG7P83436 770 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 PLIN5Q00G26 463 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 PMP22Q01453 160 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 TBX2Q13207 712 aaPredicted RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 PPIGQ13427 754 aaKnown RBP eCLIP3.82□□□□□ -1.8
COPS3-217ENST00000583160 OLIG2Q13516 323 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 MYLK3Q32MK0 819 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 ZNF876PQ49A33 203 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 ATF7IPQ6VMQ6 1270 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 GSTA5Q7RTV2 222 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 SLC44A1Q8WWI5 657 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 PSPC1Q8WXF1 523 aaKnown RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 LGALS12Q96DT0 336 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 STAMBPL1Q96FJ0 436 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 SCRN2Q96FV2 425 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 NR1H4Q96RI1 486 aaPredicted RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 TFB2MQ9H5Q4 396 aaKnown RBP3.82□□□□□ -1.8
COPS3-217ENST00000583160 SLC28A3Q9HAS3 691 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 TCP11L1Q9NUJ3 509 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 MKLN1Q9UL63 735 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 NAALADL1Q9UQQ1 740 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 CAPN7Q9Y6W3 813 aa3.82□□□□□ -1.8
COPS3-217ENST00000583160 KIAA1210Q9ULL0 1709 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 PEG3Q9GZU2 1588 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 HMGXB3Q12766 1538 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 M0QZ24 198 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 HS3ST1O14792 307 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 KCNN4O15554 427 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 PCDH7O60245 1069 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 PRKNO60260 465 aaPredicted RBP3.81□□□□□ -1.8
COPS3-217ENST00000583160 CTSVO60911 334 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 INHBAP08476 426 aa3.81□□□□□ -1.8
COPS3-217ENST00000583160 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms