RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CNOT6Q9ULM6 557 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 MSRB2Q9Y3D2 182 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 PKP3Q9Y446 797 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 OAS3Q9Y6K5 1087 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-218ENST00000582955 GOLGA4Q13439 2230 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 FAM149AA5PLN7 773 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 SLC25A14O95258 325 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 JUPP14923 745 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 AK4P27144 223 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 SPAM1P38567 509 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 ADCY8P40145 1251 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 E2F1Q01094 437 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 HES3Q5TGS1 186 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 PDPK2PQ6A1A2 396 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 SLC30A9Q6PML9 568 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 MARCH9Q86YJ5 346 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 GALNT13Q8IUC8 556 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 PHYKPLQ8IUZ5 450 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 CCDC89Q8N998 374 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 GLYATL1Q969I3 302 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 RTP4Q96DX8 246 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 CNTNAP3BQ96NU0 1288 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 PLEKHG4BQ96PX9 1271 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 CNTNAP3Q9BZ76 1288 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 ABCG4Q9H172 646 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 LRRC40Q9H9A6 602 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 IL17CQ9P0M4 197 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 VPS18Q9P253 973 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 ZNHIT2Q9UHR6 403 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 ARL5AQ9Y689 179 aa12.5□□□□□ -0.41
SMARCE1-218ENST00000582955 EME2A4GXA9 379 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 C2orf81A6NN90 581 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 STX7O15400 261 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 PSMD3O43242 534 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 KIF5CO60282 957 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 GP1BAP07359 652 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 LPOP22079 712 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 MSNP26038 577 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 LMAN1P49257 510 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 INSM1Q01101 510 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 CTBSQ01459 385 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 GSE1Q14687 1217 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 PTPRCAPQ14761 206 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 SIX1Q15475 284 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 CCNG2Q16589 344 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 ATP13A5Q4VNC0 1218 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 ZNF648Q5T619 568 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 ZDHHC20Q5W0Z9 365 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 FAM151BQ6UXP7 276 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 TMPRSS12Q86WS5 348 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 KLHDC8BQ8IXV7 354 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 SLC35F6Q8N357 371 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 GDAP1Q8TB36 358 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 MAPK15Q8TD08 544 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 GPBAR1Q8TDU6 330 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 NAT6Q93015 286 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 SCARF2Q96GP6 870 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 IL26Q9NPH9 171 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 FEZ2Q9UHY8 353 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 ZKSCAN5Q9Y2L8 839 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 PRKAB1Q9Y478 270 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 PLEKHM1Q9Y4G2 1056 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 SCN8AQ9UQD0 1980 aa12.49□□□□□ -0.41
SMARCE1-218ENST00000582955 GLYATL1P3A0A0U1RQE8 302 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 FAM221BA6H8Z2 402 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 E7EVH7 732 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 OPA1O60313 960 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 CRTAMO95727 393 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 AP2A1O95782 977 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 ETS1P14921 441 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 ACTR1BP42025 376 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 ACTR1AP61163 376 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 CHRNA6Q15825 494 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 PERM1Q5SV97 790 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 KCTD11Q693B1 232 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 DENND5AQ6IQ26 1287 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 UNQ6494/PRO21346Q6UXR6 183 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 CHST15Q7LFX5 561 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 GSTA5Q7RTV2 222 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 NRROSQ86YC3 692 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 SFTPA2Q8IWL1 248 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 OR4K2Q8NGD2 314 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 BRSK1Q8TDC3 778 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 PBKQ96KB5 322 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 OR2AG1Q9H205 316 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 RMI1Q9H9A7 625 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms