RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 ADGRE3Q9BY15 652 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 CWH43Q9H720 699 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 MEAF6Q9HAF1 191 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 SEMA4BQ9NPR2 832 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 CAPN8A6NHC0 703 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 SLC22A2O15244 555 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 OR1I1O60431 355 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 CTPS1P17812 591 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 ADSLP30566 484 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 ARL1P40616 181 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 SLC26A3P40879 764 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 DPP6P42658 865 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 SH3BP2P78314 561 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 HTRA3P83110 453 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 TLE2Q04725 743 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 RAD51Q06609 339 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 TRAF2Q12933 501 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 CEACAM7Q14002 265 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 IKBKEQ14164 716 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PTK2BQ14289 1009 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 TLR1Q15399 786 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 TSNQ15631 228 aaKnown RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 ALG1LQ6GMV1 187 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 CXorf57Q6NSI4 855 aaKnown RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 B3GNT6Q6ZMB0 384 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 DNAJB7Q7Z6W7 309 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 ARL14EPQ8N8R7 260 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-205ENST00000582730 PIP4K2CQ8TBX8 421 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 OVCA2Q8WZ82 227 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
SRSF1-205ENST00000582730 TYW5A2RUC4 315 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 BTN3A1O00481 513 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 AP1G1O43747 822 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 NIPSNAP2O75323 286 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 WISP3O95389 354 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 CR2P20023 1033 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 CHRM3P20309 590 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 RPL5P46777 297 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 STX1BP61266 288 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 HPCAP84074 193 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 SQLEQ14534 574 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 TRIM60Q495X7 471 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 TXNDC8Q6A555 127 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 KLHDC10Q6PID8 442 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 PIANPQ8IYJ0 282 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 FBXO39Q8N4B4 442 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 BHLHE22Q8NFJ8 381 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 TRMOQ9BU70 441 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 SYTL2Q9HCH5 934 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 INTS10Q9NVR2 710 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 PLK2Q9NYY3 685 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 BTRCQ9Y297 605 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 ARIH1Q9Y4X5 557 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 LAMA2P24043 3122 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 ANKRD66B4E2M5 251 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 E5RI56 91 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 CDC7O00311 574 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 CLPTM1O96005 669 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 URODP06132 367 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 HOXB8P17481 243 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 EEF1DP29692 281 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 BTG3Q14201 252 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 RFTN1Q14699 578 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 HERC3Q15034 1050 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 TYSND1Q2T9J0 566 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 PELI3Q8N2H9 469 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 METTL25Q8N6Q8 603 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 LPGAT1Q92604 370 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 ESAMQ96AP7 390 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 L3HYPDHQ96EM0 354 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 C3orf30Q96M34 536 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 PLEKHG4BQ96PX9 1271 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 BTBD9Q96Q07 612 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 KLF16Q9BXK1 252 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 UTP6Q9NYH9 597 aaKnown RBP13.6□□□□□ -0.23
SRSF1-205ENST00000582730 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 PCDHGB4Q9UN71 923 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 COMMD10Q9Y6G5 202 aa13.6□□□□□ -0.23
SRSF1-205ENST00000582730 SOD2P04179 222 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 ME2P23368 584 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 FOXA1P55317 472 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 NADK2Q4G0N4 442 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 STAG3L4Q8TBR4 150 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 ZNF558Q96NG5 402 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 GPR63Q9BZJ6 419 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 C9JVG2 144 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 H3BNX3 289 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-205ENST00000582730 CLASP2O75122 1294 aaKnown RBP13.59□□□□□ -0.23
SRSF1-205ENST00000582730 VPS26AO75436 327 aa13.59□□□□□ -0.23
SRSF1-205ENST00000582730 CDK14O94921 469 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms