RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 NOL6Q9H6R4 1146 aaKnown RBP6.18□□□□□ -1.42
TVP23B-210ENST00000582288 UBA2Q9UBT2 640 aaPredicted RBP6.18□□□□□ -1.42
TVP23B-210ENST00000582288 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
TVP23B-210ENST00000582288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.18□□□□□ -1.42
TVP23B-210ENST00000582288 ESPL1Q14674 2120 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ARHGAP10A1A4S6 786 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 BICDL2A1A5D9 508 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 TRIM49BA6NDI0 452 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 FAM72CH0Y354 149 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 TRAFD1O14545 582 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 SPAG6O75602 509 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 KIAA0754O94854 1291 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 SMC2O95347 1197 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 LSM8O95777 96 aaKnown RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 SDC4P31431 198 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 HTR7P34969 479 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 USP8P40818 1118 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 PTPN9P43378 593 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 POLD2P49005 469 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 PPM1FP49593 454 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 CCL11P51671 97 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 AP1S1P61966 158 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 BCL2L1Q07817 233 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 FAM72AQ5TYM5 149 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 IZUMO3Q5VZ72 239 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 FAM72DQ6L9T8 149 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 TRNP1Q6NT89 227 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 TTI2Q6NXR4 508 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 IGFL3Q6UXB1 125 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ADAMTSL4Q6UY14 1074 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ZNF517Q6ZMY9 492 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 GDF7Q7Z4P5 450 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 PRSS42Q7Z5A4 293 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 FAM72BQ86X60 149 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 PPP1R3BQ86XI6 285 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ZNF354CQ86Y25 554 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 GALNT13Q8IUC8 556 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 RBMXL3Q8N7X1 1067 aaKnown RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 TMEM102Q8N9M5 508 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ST6GALNAC3Q8NDV1 305 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 FDCSPQ8NFU4 85 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ADAMTS17Q8TE56 1095 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 KLHL6Q8WZ60 621 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 CENPIQ92674 756 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 POM121Q96HA1 1249 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 EXOC2Q96KP1 924 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 SPATA32Q96LK8 384 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 RAB33BQ9H082 229 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 KLC2Q9H0B6 622 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 CATSPERBQ9H7T0 1116 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 RMI1Q9H9A7 625 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ASF1BQ9NVP2 202 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 VPS18Q9P253 973 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 B4GALT6Q9UBX8 382 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 ZNHIT2Q9UHR6 403 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 B3GNT3Q9Y2A9 372 aa6.17□□□□□ -1.42
TVP23B-210ENST00000582288 KLF2Q9Y5W3 355 aaPredicted RBP6.17□□□□□ -1.42
TVP23B-210ENST00000582288 HIVEP1P15822 2718 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 ARGFXA6NJG6 315 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 FGF10O15520 208 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 HTRA2O43464 458 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 PRAMEF11O60813 436 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 SOCS5O75159 536 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 IPO13O94829 963 aaKnown RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 TMEM63AO94886 807 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CYP2A6P11509 494 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 F3P13726 295 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 XRCC1P18887 633 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 EPHB2P29323 1055 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 VIPR1P32241 457 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CLCN1P35523 988 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CLCNKAP51800 687 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 RRADP55042 308 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 KRT85P78386 507 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 PDE1BQ01064 536 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 ART3Q13508 389 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 ZNF235Q14590 738 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 TESK1Q15569 626 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CNGA3Q16281 694 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 FOXD4L6Q3SYB3 417 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 TMCO4Q5TGY1 634 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 VWA5B1Q5TIE3 1220 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 CPZQ66K79 652 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 RAET1GQ6H3X3 334 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 FOXD4L3Q6VB84 417 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 ZNF765Q7L2R6 523 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 ZNF761Q86XN6 746 aaPredicted RBP6.16□□□□□ -1.42
TVP23B-210ENST00000582288 FAM71AQ8IYT1 594 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 UBE2Q2Q8WVN8 375 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 HDAC11Q96DB2 347 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 C19orf60Q96EN9 201 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 COX14Q96I36 57 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 LURAP1Q96LR2 239 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 LRFN5Q96NI6 719 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 AGAP3Q96P47 875 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 RANBP9Q96S59 729 aa6.16□□□□□ -1.42
TVP23B-210ENST00000582288 NUDT9Q9BW91 350 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms