RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 DNAJC6O75061 913 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LEFTY1O75610 366 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SNUPNO95149 360 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MPOP05164 745 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HNF1BP35680 557 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PRAMEP78395 509 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SEMA3AQ14563 771 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PDGFRLQ15198 375 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CNSTQ6PJW8 725 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CACUL1Q86Y37 369 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LMNTD2Q8IXW0 634 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ATP13A3Q9H7F0 1226 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NMRAL1Q9HBL8 299 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LNPEPQ9UIQ6 1025 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PLA2G4CQ9UP65 541 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MTF2Q9Y483 593 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 USP34Q70CQ2 3546 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CLDN7O95471 211 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GOT2P00505 430 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CES1P23141 567 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MTHFRP42898 656 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SULT2A1Q06520 285 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RFLNAQ6ZTI6 216 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZC3HC1Q86WB0 502 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SPATA6LQ8N4H0 392 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FAM136AQ96C01 138 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NDNQ99608 321 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SUV39H2Q9H5I1 410 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 POLR3BQ9NW08 1133 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ATG2BQ96BY7 2078 aa12.64□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ANKRD33BA6NCL7 494 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C2CD4DB7Z1M9 353 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TK2O00142 265 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ARNTLO00327 626 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HTRA2O43464 458 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HSPA4LO95757 839 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ATP5BP06576 529 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ASGR2P07307 311 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PAMP19021 973 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MRPS35P82673 323 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MXRA7P84157 204 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MIA3Q5JRA6 1907 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TXNDC11Q6PKC3 985 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC30A9Q6PML9 568 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TERB1Q8NA31 727 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CDKN2AIPNLQ96HQ2 116 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TSC22D3Q99576 134 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TUBB6Q9BUF5 446 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RHOJQ9H4E5 214 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NSMCE4AQ9NXX6 385 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CACNA2D2Q9NY47 1150 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FKBPLQ9UIM3 349 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CD207Q9UJ71 328 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SARDHQ9UL12 918 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC27A6Q9Y2P4 619 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CRYL1Q9Y2S2 319 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NPIPB15A6NHN6 443 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PLK4O00444 970 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GRK2P25098 689 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SERPINA4P29622 427 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PGM1P36871 562 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NNMTP40261 264 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CCR10P46092 362 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ABCE1P61221 599 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 DMC1Q14565 340 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SPDYAQ5MJ70 313 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FAM219BQ5XKK7 198 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MAVSQ7Z434 540 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PHTF2Q8N3S3 785 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PCDH20Q8N6Y1 951 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KCTD4Q8WVF5 259 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SUSD6Q92537 303 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ELMO2Q96JJ3 720 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RANBP9Q96S59 729 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GAS2L1Q99501 681 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 THTPAQ9BU02 230 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GPR63Q9BZJ6 419 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MRM3Q9HC36 420 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FBXO5Q9UKT4 447 aa12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RUVBL2Q9Y230 463 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C1orf232A0A0U1RR37 186 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HNRNPCL1O60812 293 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 POP4O95707 220 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CA5AP35218 305 aa12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RECQLP46063 649 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZNF140P52738 457 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SEC13P55735 322 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms