RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 PER3P56645 1201 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 APBA1Q02410 837 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 ELOAQ14241 798 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 C15orf59Q2T9L4 293 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 CCDC14Q49A88 953 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 CRB2Q5IJ48 1285 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 STRADAQ7RTN6 431 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 PRSS42Q7Z5A4 293 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 HSD11B1LQ7Z5J1 315 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 PPP1R3BQ86XI6 285 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 GALNT13Q8IUC8 556 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 EMC1Q8N766 993 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 AVL9Q8NBF6 648 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 ADAMTS17Q8TE56 1095 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 LURAP1Q96LR2 239 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 SMAD5Q99717 465 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 TBC1D10AQ9BXI6 508 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 LRRC19Q9H756 370 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 UCK1Q9HA47 277 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 OGFRQ9NZT2 677 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 TBC1D29Q9UFV1 150 aa13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 G3BP2Q9UN86 482 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-211ENST00000579316 KIR2DS5A0A0G2JLQ3 304 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 A0A0G2JNG1 304 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 J3KR12 359 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 KIR2DS3K7RE56 304 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 LSM8O95777 96 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 SLC2A4P14672 509 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 SLC9A1P19634 815 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 LHCGRP22888 699 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 PTPN9P43378 593 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 HDAC4P56524 1084 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 RPS18P62269 152 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 NSUN2Q08J23 767 aaKnown RBP eCLIP13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 KIR2DS5Q14953 304 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 TESK1Q15569 626 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 CDO1Q16878 200 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 PLEKHN1Q494U1 663 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 C2CD6Q53TS8 623 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 CYB5D1Q6P9G0 228 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 FAM71AQ8IYT1 594 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 LZTR1Q8N653 840 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 GLIS1Q8NBF1 620 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 NSMCE3Q96MG7 304 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 FCRL4Q96PJ5 515 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 NAT10Q9H0A0 1025 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
CSNK1D-211ENST00000579316 A0A1W2PQ67 120 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 FOXN3O00409 490 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 HTRA2O43464 458 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 TIAF1O95411 115 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 SDC4P31431 198 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 BPIFB4P59827 614 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 AP1S1P61966 158 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 RPS15P62841 145 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 UBE2IP63279 158 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 Q6ZVL8 140 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 ST6GALNAC3Q8NDV1 305 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 RXFP2Q8WXD0 754 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 KLHL6Q8WZ60 621 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 ELMO2Q96JJ3 720 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 AKIRIN1Q9H9L7 192 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 METTL5Q9NRN9 209 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 GPR83Q9NYM4 423 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 CPNE7Q9UBL6 633 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 CNOT8Q9UFF9 292 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 AJAP1Q9UKB5 411 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 B3GNT3Q9Y2A9 372 aa13.69□□□□□ -0.22
CSNK1D-211ENST00000579316 GOLGA6CA6NDK9 693 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 GOLGA6BA6NDN3 693 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 OR5K4A6NMS3 321 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 FGF10O15520 208 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 GOLGA6DP0CG33 693 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 F3P13726 295 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 PTGER4P35408 488 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 GPR1P46091 355 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 SEPHS1P49903 392 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 TYRO3Q06418 890 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 CDK18Q07002 472 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 ZNF517Q6ZMY9 492 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 GBP6Q6ZN66 633 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 MARK2Q7KZI7 788 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 GDF7Q7Z4P5 450 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 NLRP8Q86W28 1048 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 CREBRFQ8IUR6 639 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 PYROXD2Q8N2H3 581 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 PAF1Q8N7H5 531 aa13.68□□□□□ -0.22
CSNK1D-211ENST00000579316 FNIP1Q8TF40 1166 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms