RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 ZNF112Q9UJU3 913 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PSMD13Q9UNM6 376 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 GREB1LQ9C091 1923 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 ACOD1A6NK06 481 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 KBTBD13C9JR72 458 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 TERTO14746 1132 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 SNNO75324 88 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 DHFRP00374 187 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 CDK1P06493 297 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 HOXA13P31271 388 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 SREBF1P36956 1147 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ELK3P41970 407 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 NME3Q13232 169 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 KCNC3Q14003 757 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 DOC2AQ14183 400 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SLC14A2Q15849 920 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 LDLRAP1Q5SW96 308 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 RARS2Q5T160 578 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 KRT39Q6A163 491 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 TXNRD3NBQ6F5E7 133 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 TRIM72Q6ZMU5 477 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 FRMD7Q6ZUT3 714 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 OTOP1Q7RTM1 612 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ZNF354CQ86Y25 554 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ERO1BQ86YB8 467 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 CHERPQ8IWX8 916 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 RCOR2Q8IZ40 523 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PDIK1LQ8N165 341 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 FBXW8Q8N3Y1 598 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 DPP10Q8N608 796 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 KDM1BQ8NB78 822 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ABHD11Q8NFV4 315 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 METTL6Q8TCB7 284 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PDCD6IPQ8WUM4 868 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 HTRA1Q92743 480 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ATOH1Q92858 354 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 ZHX1-C8orf76Q96EF9 292 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 MRPL48Q96GC5 212 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 MMP19Q99542 508 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 NAA50Q9GZZ1 169 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 FAM198AQ9UFP1 575 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 FBXL21Q9UKT6 434 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SORCS3Q9UPU3 1222 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 C6orf229H3BNL8 230 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 NOL3O60936 208 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 LYPLA1O75608 230 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 TOP3BO95985 862 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 CD63P08962 238 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 CSF2RAP15509 400 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 IMPDH1P20839 514 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ATP5C1P36542 298 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 PRKAA2P54646 552 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 CDH15P55291 814 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 EIF3EP60228 445 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 RPL7AP62424 266 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 DYNLT1P63172 113 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 C1QBPQ07021 282 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 BTN1A1Q13410 526 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PICALMQ13492 652 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 FAM182AQ5T1J6 154 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 AGAP6Q5VW22 663 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SLFN12LQ6IEE8 588 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 CASC4Q6P4E1 433 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PKN3Q6P5Z2 889 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SPOCD1Q6ZMY3 1216 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SMIM5Q71RC9 77 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 C12orf40Q86WS4 652 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 CTAGE3PQ8IX95 158 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 DSELQ8IZU8 1212 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ZCCHC7Q8N3Z6 543 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 LIX1Q8N485 282 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PPM1NQ8N819 430 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SNX31Q8N9S9 440 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PCSK9Q8NBP7 692 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 GPR156Q8NFN8 814 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 SLC7A14Q8TBB6 771 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 URGCPQ8TCY9 931 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ST8SIA4Q92187 359 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 RELTQ969Z4 430 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 COL26A1Q96A83 441 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 RNF170Q96K19 258 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ZNF778Q96MU6 729 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 AGAP4Q96P64 663 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 BBS4Q96RK4 519 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 TTYH2Q9BSA4 534 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 GCOM2Q9BZD3 368 aaPredicted RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 B3GNT2Q9NY97 397 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 NPAP1Q9NZP6 1156 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 TMEM9Q9P0T7 183 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 NYAP2Q9P242 653 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 ITGA11Q9UKX5 1188 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 PCDHGA9Q9Y5G4 932 aaKnown RBP7.48□□□□□ -1.21
DDX42-207ENST00000578593 AUP1Q9Y679 476 aa7.48□□□□□ -1.21
DDX42-207ENST00000578593 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
DDX42-207ENST00000578593 hCG_1818297A0A087WSY0 165 aa7.47□□□□□ -1.21
DDX42-207ENST00000578593 TTLL8A6PVC2 850 aa7.47□□□□□ -1.21
DDX42-207ENST00000578593 HACD1B0YJ81 288 aa7.47□□□□□ -1.21
DDX42-207ENST00000578593 RRP8O43159 456 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms