RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SPINT1O43278 529 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 NARSO43776 548 aaKnown RBP18.44■□□□□ 0.54
PRKCA-203ENST00000578063 ESR1P03372 595 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF7P17097 686 aaPredicted RBP18.44■□□□□ 0.54
PRKCA-203ENST00000578063 ACRV1P26436 265 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 FMO4P31512 558 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 SERPINB4P48594 390 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 CDKN2DP55273 166 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 SATB1Q01826 763 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF460Q14592 562 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 CST6Q15828 149 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 TSNAXIP1Q2TAA8 658 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 FBXO43Q4G163 708 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 C2orf27AQ580R0 203 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF776Q68DI1 518 aaPredicted RBP18.44■□□□□ 0.54
PRKCA-203ENST00000578063 LIPIQ6XZB0 460 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 TBC1D1Q86TI0 1168 aaPredicted RBP18.44■□□□□ 0.54
PRKCA-203ENST00000578063 RBFAQ8N0V3 343 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 IL17RCQ8NAC3 791 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 ARMC2Q8NEN0 867 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 OR2T3Q8NH03 318 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 CHMP6Q96FZ7 201 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 FAM83DQ9H4H8 585 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 GPAMQ9HCL2 828 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 PCDHB1Q9Y5F3 818 aa18.44■□□□□ 0.54
PRKCA-203ENST00000578063 GMNCA6NCL1 334 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 PRMT5O14744 637 aaPredicted RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 PLIN3O60664 434 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 APOA4P06727 396 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 PKMP14618 531 aaKnown RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 C5AR1P21730 350 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CD9P21926 228 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 RPS3P23396 243 aaKnown RBP eCLIP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 SLC26A3P40879 764 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 P2RY2P41231 377 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 KPNA2P52292 529 aaKnown RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CCDC15Q0P6D6 951 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 ITIH4Q14624 930 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 RGS9BPQ6ZS82 235 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 NRSN1Q8IZ57 195 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 PLD6Q8N2A8 252 aaKnown RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 NXPE1Q8N323 547 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 BIRC8Q96P09 236 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 C1QTNF1Q9BXJ1 281 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 SMOXQ9NWM0 555 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 TAS2R13Q9NYV9 303 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 EMCNQ9ULC0 261 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 ITM2BQ9Y287 266 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 GOLGA8CPA6NN73 597 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 LOC730098B7Z3J9 87 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 OR1I1O60431 355 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 KLF8O95600 359 aaPredicted RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 PROCP04070 461 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 HOXB2P14652 356 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 ETV3P41162 512 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CNTN1Q12860 1018 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 HSF5Q4G112 596 aaPredicted RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 TMEM52BQ4KMG9 183 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 RFLNAQ6ZTI6 216 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 Q6ZVL8 140 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 TECPR1Q7Z6L1 1165 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CENPLQ8N0S6 344 aaPredicted RBP18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CCDC63Q8NA47 563 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CLPBQ9H078 707 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 P2RY12Q9H244 342 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 TMEM216Q9P0N5 145 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 MID2Q9UJV3 735 aa18.43■□□□□ 0.54
PRKCA-203ENST00000578063 CKAP5Q14008 2032 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 NEMP1O14524 444 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 WNT9AO14904 365 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 BIRC5O15392 142 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 VPS26AO75436 327 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 RHOBTB1O94844 696 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 KLHL2O95198 593 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 WISP3O95389 354 aaPredicted RBP18.42■□□□□ 0.54
PRKCA-203ENST00000578063 PYGLP06737 847 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 IL9P15248 144 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 UGT1A6P19224 532 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 UGT1A1P22309 533 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 UGT1A4P22310 534 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 UGT1A3P35503 534 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 UGT1A5P35504 534 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 LIG3P49916 1009 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 ACOX1Q15067 660 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF284Q2VY69 593 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 ATP13A5Q4VNC0 1218 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 SLC44A4Q53GD3 710 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 CTSL3PQ5NE16 218 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 PIP5KL1Q5T9C9 394 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 C16orf46Q6P387 395 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 CYP2U1Q7Z449 544 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 TRAM1L1Q8N609 369 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 TXNDC5Q8NBS9 432 aaKnown RBP18.42■□□□□ 0.54
PRKCA-203ENST00000578063 LRRC8CQ8TDW0 803 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 KCTD4Q8WVF5 259 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 FAM3CQ92520 227 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 KCNJ9Q92806 393 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF317Q96PQ6 595 aaPredicted RBP18.42■□□□□ 0.54
PRKCA-203ENST00000578063 ZSCAN5AQ9BUG6 496 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 WRAP53Q9BUR4 548 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms