RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 JCHAINP01591 159 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 AK4P27144 223 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 TSPAN7P41732 249 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ACTR1BP42025 376 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 MAZP56270 477 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ACTR1AP61163 376 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 CFHR1Q03591 330 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 TFDP2Q14188 446 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 MESDQ14696 234 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 KIR2DS5Q14953 304 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 TMEM71Q6P5X7 295 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ZNF574Q6ZN55 896 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 TMPRSS9Q7Z410 1059 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 TMC3Q7Z5M5 1100 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 NT5DC3Q86UY8 548 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 RHOT1Q8IXI2 618 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ZNF843Q8N446 348 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 Q8N9G6 341 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 AGBL5Q8NDL9 886 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 DDA1Q9BW61 102 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 MAK16Q9BXY0 300 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ZFYVE1Q9HBF4 777 aa14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 ASH1LQ9NR48 2969 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-213ENST00000578044 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 PMS2P1A4D2B8 440 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 CHUKO15111 745 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 PPM1DO15297 605 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 PSTPIP1O43586 416 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 NUAK1O60285 661 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 LCA5LO95447 670 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 THRAP10827 490 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 CD86P42081 329 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 POLD2P49005 469 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 RAB15P59190 212 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 TBX2Q13207 712 aaPredicted RBP14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 TEX44Q53QW1 395 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 ZDHHC20Q5W0Z9 365 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 LYSMD3Q7Z3D4 306 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 CPNE8Q86YQ8 564 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 SFTPA2Q8IWL1 248 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 LPCAT1Q8NF37 534 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 MED8Q96G25 268 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 TEFMQ96QE5 360 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 TAAR9Q96RI9 348 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 VAT1Q99536 393 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 CHP1Q99653 195 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 SEMA6CQ9H3T2 930 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 TRABDQ9H4I3 376 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 TRIM39Q9HCM9 518 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 PISDQ9UG56 409 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 PCDHB11Q9Y5F2 797 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
SMARCE1-213ENST00000578044 A0A0A6YYK5 440 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 C9orf172C9J069 976 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 KCNK1O00180 336 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 EFSO43281 561 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 VEGFDO43915 354 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 KCNJ13O60928 360 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 SFTPCP11686 197 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 F3P13726 295 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 ALDH4A1P30038 563 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 OR1D5P58170 312 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 CDK18Q07002 472 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 BIRC2Q13490 618 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 C16orf72Q14CZ0 275 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 PRKD1Q15139 912 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 PTPRRQ15256 657 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 SARM1Q6SZW1 724 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 WASH2PQ6VEQ5 465 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 RFLNAQ6ZTI6 216 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 TRAM1L1Q8N609 369 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 OR10G6Q8NH81 332 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 PTCD2Q8WV60 388 aaKnown RBP14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 TEKT5Q96M29 485 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 VPS35Q96QK1 796 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 AGAP2Q99490 1192 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 ZPBPQ9BS86 351 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 WASH6PQ9NQA3 447 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 CD84Q9UIB8 345 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
SMARCE1-213ENST00000578044 HEY1Q9Y5J3 304 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms