RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 NRROSQ86YC3 692 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 SLC35F3Q8IY50 421 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 PRELID2Q8N945 189 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 GLIS1Q8NBF1 620 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 SCG3Q8WXD2 468 aaKnown RBP19.17■□□□□ 0.66
SS18-208ENST00000577751 GLYATL1Q969I3 302 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 C19orf43Q9BQ61 176 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 ETNK1Q9HBU6 452 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 IL26Q9NPH9 171 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 TMPRSS11EQ9UL52 423 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 DOLKQ9UPQ8 538 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 ST14Q9Y5Y6 855 aa19.17■□□□□ 0.66
SS18-208ENST00000577751 PLXNB3Q9ULL4 1909 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 EME2A4GXA9 379 aaPredicted RBP19.16■□□□□ 0.66
SS18-208ENST00000577751 ERI2A8K979 691 aaKnown RBP19.16■□□□□ 0.66
SS18-208ENST00000577751 IFNB1P01574 187 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 ETS1P14921 441 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 SPINK2P20155 84 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 LPOP22079 712 aaPredicted RBP19.16■□□□□ 0.66
SS18-208ENST00000577751 FDFT1P37268 417 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 ADCY8P40145 1251 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 GNPDA1P46926 289 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 TCEA2Q15560 299 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 OGFOD3Q6PK18 319 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 DHRS13Q6UX07 377 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 TAF8Q7Z7C8 310 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 GLMNQ92990 594 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 VPS35Q96QK1 796 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 OSBPL9Q96SU4 736 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 RMI1Q9H9A7 625 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 TRIM39Q9HCM9 518 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 EVA1BQ9NVM1 165 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 PKP3Q9Y446 797 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 NEUROG3Q9Y4Z2 214 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 ARL5AQ9Y689 179 aa19.16■□□□□ 0.66
SS18-208ENST00000577751 ARHGEF17Q96PE2 2063 aaPredicted RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 C2orf81A6NN90 581 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 CES2O00748 559 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 GAPDHSO14556 408 aaPredicted RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 BUD23O43709 281 aaKnown RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 SUN1O94901 812 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 SLC25A14O95258 325 aaPredicted RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 ASMTLO95671 621 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 GP1BAP07359 652 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 ZSCAN5DPP0CG00 497 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 RPL22P35268 128 aaKnown RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 ACTN2P35609 894 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 SPAM1P38567 509 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 SEMA5AQ13591 1074 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 PTPRCAPQ14761 206 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 NR0B2Q15466 257 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 ATP13A5Q4VNC0 1218 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 CCDC157Q569K6 752 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 TAB3Q8N5C8 712 aaPredicted RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 ARL10Q8N8L6 244 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 CCDC89Q8N998 374 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 GPR156Q8NFN8 814 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 COG1Q8WTW3 980 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 MS4A14Q96JA4 679 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 PAK5Q9P286 719 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 ATXN10Q9UBB4 475 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 KLK13Q9UKR3 277 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 SNX12Q9UMY4 172 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 GPR34Q9UPC5 381 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 PCYT1BQ9Y5K3 369 aaPredicted RBP19.15■□□□□ 0.66
SS18-208ENST00000577751 MYLKQ15746 1914 aa19.15■□□□□ 0.66
SS18-208ENST00000577751 ZFC3H1O60293 1989 aaKnown RBP19.14■□□□□ 0.65
SS18-208ENST00000577751 STX7O15400 261 aaKnown RBP19.14■□□□□ 0.65
SS18-208ENST00000577751 NUAK1O60285 661 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 CRTAMO95727 393 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 KCNJ1P48048 391 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 RPIAP49247 311 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 PDE1BQ01064 536 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 E2F1Q01094 437 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 CTBSQ01459 385 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 ILF3Q12906 894 aaKnown RBP eCLIP19.14■□□□□ 0.65
SS18-208ENST00000577751 GUSBP11Q6P575 273 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 C4orf22Q6V702 233 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 MARK2Q7KZI7 788 aaKnown RBP19.14■□□□□ 0.65
SS18-208ENST00000577751 ADGRG6Q86SQ4 1221 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 LINC00523Q86TU6 105 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 GALNT15Q8N3T1 639 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 FAM46DQ8NEK8 389 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 ACTRT1Q8TDG2 376 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 OR2M4Q96R27 311 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 GSDMCQ9BYG8 508 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 MSRB2Q9Y3D2 182 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 KCTD3Q9Y597 815 aa19.14■□□□□ 0.65
SS18-208ENST00000577751 GLYATL1P3A0A0U1RQE8 302 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 GPR89AB7ZAQ6 455 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 CHUKO15111 745 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 LDB2O43679 373 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 GPR89BP0CG08 455 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 AK4P27144 223 aaPredicted RBP19.13■□□□□ 0.65
SS18-208ENST00000577751 CHRNA6Q15825 494 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 CYP1B1Q16678 543 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 TMPRSS12Q86WS5 348 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 C17orf82Q86X59 251 aaPredicted RBP19.13■□□□□ 0.65
SS18-208ENST00000577751 GALNT13Q8IUC8 556 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 PHYKPLQ8IUZ5 450 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms