RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LOXL2Q9Y4K0 774 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 LRRFIP2Q9Y608 721 aaKnown RBP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 CYP46A1Q9Y6A2 500 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 CEPT1Q9Y6K0 416 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 AGRNO00468 2067 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 ZCWPW2A0A1B0GU75 182 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 A0A1W2PP11 408 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 A0A1W2PRG0 241 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 TSPAN4O14817 238 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 SPINT2O43291 252 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 PRKNO60260 465 aaPredicted RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 INHBAP08476 426 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 FAM106CPP0CH98 169 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 UGT1A1P22309 533 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 EPHA8P29322 1005 aaPredicted RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 APOBEC1P41238 236 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 FMO5P49326 533 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 CSNK2A1P68400 391 aaPredicted RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 RPL24P83731 157 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 PDE1BQ01064 536 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 FOXM1Q08050 763 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 GTF2H2Q13888 395 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 DHX8Q14562 1220 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF239Q16600 458 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 TMEM95Q3KNT9 176 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 RAB6CQ53S08 254 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 PDSS1Q5T2R2 415 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 GTF2H2CQ6P1K8 395 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF852Q6ZMS4 543 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 TSPYL6Q8N831 410 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 CSNK2A3Q8NEV1 391 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 DMBX1Q8NFW5 382 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 CADM4Q8NFZ8 388 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 TRIM58Q8NG06 486 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 OR5R1Q8NH85 324 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 RNF125Q96EQ8 232 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 ALG14Q96F25 216 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 F2RL3Q96RI0 385 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 ACOX2Q99424 681 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 TMEM47Q9BQJ4 181 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 AGXT2Q9BYV1 514 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 RAB6CQ9H0N0 254 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 RANBP17Q9H2T7 1088 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 NDST4Q9H3R1 872 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 PRKRIP1Q9H875 184 aaPredicted RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 PPCSQ9HAB8 311 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 SLC6A13Q9NSD5 602 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 TAAR2Q9P1P5 351 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 INTS6Q9UL03 887 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 AAR2Q9Y312 384 aaKnown RBP2.35□□□□□ -2.03
TOP2A-202ENST00000577541 OR2W1Q9Y3N9 320 aa2.35□□□□□ -2.03
TOP2A-202ENST00000577541 LRRC53A6NM62 1247 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 FAM90A26D6RGX4 464 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 KCNN4O15554 427 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 ZNHIT1O43257 154 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 SYNGR3O43761 229 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 PAGE4O60829 102 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 POLBP06746 335 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 TUBBP07437 444 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 NR1D1P20393 614 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 UBA1P22314 1058 aaKnown RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 GGT5P36269 586 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 NR2C2P49116 596 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 GNAQP50148 359 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 HSD17B4P51659 736 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 CLCN3P51790 818 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 TERF1P54274 439 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 EIF3BP55884 814 aaKnown RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 TAS2R38P59533 333 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 TUBB4BP68371 445 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 SORDQ00796 357 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 GRIK2Q13002 908 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 TDGQ13569 410 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 DRAP1Q14919 205 aaPredicted RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 MYLK3Q32MK0 819 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 CXorf66Q5JRM2 361 aaPredicted RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 DCST1Q5T197 706 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 STXBP5Q5T5C0 1151 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 IRAK1BP1Q5VVH5 260 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 DUS1LQ6P1R4 473 aaKnown RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 PAPD4Q6PIY7 484 aaKnown RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 ATG9AQ7Z3C6 839 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 CERS3Q8IU89 383 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 EPHX4Q8IUS5 362 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 GRAPLQ8TC17 118 aaPredicted RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 PSPC1Q8WXF1 523 aaKnown RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 ST8SIA4Q92187 359 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 IGSF8Q969P0 613 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 SAAL1Q96ER3 474 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 GRAMD2BQ96HH9 432 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 SCLT1Q96NL6 688 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 MAP7D2Q96T17 732 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 MTERF1Q99551 399 aaKnown RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 LITAFQ99732 161 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 CMKLR1Q99788 373 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 UBXN6Q9BZV1 441 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 ACSS1Q9NUB1 689 aaPredicted RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 FAM118AQ9NWS6 357 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 RRN3Q9NYV6 651 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 POLG2Q9UHN1 485 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms