RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 CLASP2O75122 1294 aaKnown RBP23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 TSPAN12O95859 305 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 PENKP01210 267 aaPredicted RBP23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 EEF1DP29692 281 aaKnown RBP23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 ADSLP30566 484 aaPredicted RBP23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 CD70P32970 193 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 RAD51Q06609 339 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 HERC3Q15034 1050 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 FAM217AQ8IXS0 508 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 OR9I1Q8NGQ6 314 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 EEF1AKMT1Q8WVE0 214 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 PIH1D2Q8WWB5 315 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 ESAMQ96AP7 390 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 MYO19Q96H55 970 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 ANKRD27Q96NW4 1050 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 GPR63Q9BZJ6 419 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 CCDC167Q9P0B6 97 aa23.52■■□□□ 1.36
NPLOC4-217ENST00000574897 FKBP6O75344 327 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 RFC2P35250 354 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 AGTR2P50052 363 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 LMAN2Q12907 356 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 C16orf89Q6UX73 402 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 CD200R1Q8TD46 325 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 MRPS31Q92665 395 aaKnown RBP23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 FUBP1Q96AE4 644 aaKnown RBP23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 RPL10LQ96L21 214 aaKnown RBP23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 WDR41Q9HAD4 459 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 SEMA4BQ9NPR2 832 aaPredicted RBP23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 TLR9Q9NR96 1032 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 HELZP42694 1942 aaKnown RBP23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 A8MX80 341 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 TTPAP49638 278 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 SEMG2Q02383 582 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 CEACAM7Q14002 265 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 GEN1Q17RS7 908 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 BNC2Q6ZN30 1099 aaPredicted RBP23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 CPNE9Q8IYJ1 553 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 FBXO39Q8N4B4 442 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 STAG3L4Q8TBR4 150 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 SLC22A17Q8WUG5 538 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 C19orf60Q96EN9 201 aa23.51■■□□□ 1.35
NPLOC4-217ENST00000574897 CHD7Q9P2D1 2997 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 PGLSO95336 258 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 TIMP1P01033 207 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ACADSP16219 412 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 XRCC1P18887 633 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ATXN3P54252 364 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ECT2LQ008S8 904 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 AGKQ53H12 422 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ARMC12Q5T9G4 340 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 FAM151BQ6UXP7 276 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 LARP4Q71RC2 724 aaKnown RBP eCLIP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 RAB44Q7Z6P3 723 aaPredicted RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 LSM7Q9UK45 103 aaKnown RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 INTS6Q9UL03 887 aaKnown RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 SH3BP1Q9Y3L3 701 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 VPS26AO75436 327 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ALDOCP09972 364 aaKnown RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 CHRM3P20309 590 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ART3Q13508 389 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 FASTKQ14296 549 aaKnown RBP23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 LINGO1Q96FE5 620 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 EFCAB1Q9HAE3 211 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 ASB1Q9Y576 335 aa23.5■■□□□ 1.35
NPLOC4-217ENST00000574897 GPC4O75487 556 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 LRG1P02750 347 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 C8AP07357 584 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 CTSOP43234 321 aaPredicted RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 HK3P52790 923 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 ZNF423Q2M1K9 1284 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PIGGQ5H8A4 983 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 AAGABQ6PD74 315 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 CLYBLQ8N0X4 340 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PGAM4Q8N0Y7 254 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PCDH20Q8N6Y1 951 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PPFIBP2Q8ND30 876 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 FAM156AQ8NDB6 213 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 C2orf49Q9BVC5 232 aaPredicted RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 TUBB1Q9H4B7 451 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 HCFC1R1Q9NWW0 138 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 TRMT6Q9UJA5 497 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 ADAMTS6Q9UKP5 1117 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 BTRCQ9Y297 605 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PKP3Q9Y446 797 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 H7C0S8 307 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PSMD12O00232 456 aaPredicted RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 FBP2O00757 339 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PIP5K1BO14986 540 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 MAP3K7O43318 606 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 LINC00271P0C7V0 271 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 HSPA1AP0DMV8 641 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 HSPA1BP0DMV9 641 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PRDX3P30048 256 aaKnown RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 STK19P49842 368 aaPredicted RBP23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 LRRC36Q1X8D7 754 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 ANO7Q6IWH7 933 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 PAF1Q8N7H5 531 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 TWIST2Q8WVJ9 160 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 CORO1BQ9BR76 489 aa23.49■■□□□ 1.35
NPLOC4-217ENST00000574897 AKTIPQ9H8T0 292 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms