RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 LCP2Q13094 533 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 RAB39AQ14964 217 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 CCL14Q16627 93 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 FSCN1Q16658 493 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 MS4A13Q5J8X5 152 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TAF2Q6P1X5 1199 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 CROCCP3Q8IVE0 287 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SCN4BQ8IWT1 228 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 DHRSXQ8N5I4 330 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 KCTD14Q9BQ13 255 aaPredicted RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 RPF2Q9H7B2 306 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 ZNF408Q9H9D4 720 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 CD320Q9NPF0 282 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TMEM248Q9NWD8 314 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SH3BP1Q9Y3L3 701 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SH3PXD2BA1X283 911 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 H3BMQ9 156 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 BAIAP3O94812 1187 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 CHRNA1P02708 482 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 PRDX3P30048 256 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 CAPGP40121 348 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 PURAQ00577 322 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TSPY1Q01534 308 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TNK2Q07912 1038 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 FAM110CQ1W6H9 321 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 GPR107Q5VW38 600 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 MRNIPQ6NTE8 343 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 MSANTD2Q6P1R3 559 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 ABRAXAS1Q6UWZ7 409 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 USP50Q70EL3 339 aaPredicted RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 ANKRD23Q86SG2 305 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 PTRH1Q86Y79 214 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 GPR150Q8NGU9 434 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 MAGEE2Q8TD90 523 aaPredicted RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 COG8Q96MW5 612 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 AARSD1Q9BTE6 412 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SEZ6LQ9BYH1 1024 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 AP5M1Q9H0R1 490 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 POLR1BQ9H9Y6 1135 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SMPD3Q9NY59 655 aaPredicted RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TLR6Q9Y2C9 796 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SNAP29O95721 258 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 C7P10643 843 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 UFM1P61960 85 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 GALNT3Q14435 633 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 MAPRE1Q15691 268 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 ANKDD1AQ495B1 522 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 CHST15Q7LFX5 561 aaPredicted RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 PATL1Q86TB9 770 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 KIAA2013Q8IYS2 634 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 CYP2S1Q96SQ9 504 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 SEMA3CQ99985 751 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 KATNAL1Q9BW62 490 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 NAA50Q9GZZ1 169 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 CHCHD3Q9NX63 227 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 GIPC1O14908 333 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 MUSKO15146 869 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 CYBBP04839 570 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 FCGR1AP12314 374 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 RPS9P46781 194 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 YAP1P46937 504 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 RCAN2Q14206 197 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 SETMARQ53H47 684 aaPredicted RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 TBPL2Q6SJ96 375 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 PAQR3Q6TCH7 311 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 SCIMPQ6UWF3 145 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 TMEM26Q6ZUK4 368 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 MRPL10Q7Z7H8 261 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 THEM5Q8N1Q8 247 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 FBXO39Q8N4B4 442 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 IGSF8Q969P0 613 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 SLC30A3Q99726 388 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 PIF1Q9H611 641 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 CATSPERZQ9NTU4 200 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 ANAPC2Q9UJX6 822 aa18.96■□□□□ 0.63
SCARF1-206ENST00000573852 TDRKHQ9Y2W6 561 aaKnown RBP18.96■□□□□ 0.63
SCARF1-206ENST00000573852 KERAO60938 352 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 RPP40O75818 363 aaKnown RBP18.95■□□□□ 0.62
SCARF1-206ENST00000573852 PRR35P0CG20 571 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 KCNK10P57789 538 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 PLCL1Q15111 1095 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 SPATS1Q496A3 300 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 PYCR3Q53H96 274 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 OGFOD2Q6N063 350 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 CIR1Q86X95 450 aaPredicted RBP18.95■□□□□ 0.62
SCARF1-206ENST00000573852 PAPD5Q8NDF8 572 aaKnown RBP18.95■□□□□ 0.62
SCARF1-206ENST00000573852 OR4L1Q8NH43 312 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 MIPOL1Q8TD10 442 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 FAM210AQ96ND0 272 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 DOK1Q99704 481 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 POPDC3Q9HBV1 291 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 AIG1Q9NVV5 245 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 RNF112Q9ULX5 631 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 CLEC11AQ9Y240 323 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 FAM50BQ9Y247 325 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 V9GYQ6 96 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 KPNA6O60684 536 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 CRCPO75575 148 aa18.95■□□□□ 0.62
SCARF1-206ENST00000573852 DCKP27707 260 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms