RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 USP39Q53GS9 565 aaKnown RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 NADSYN1Q6IA69 706 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 KBTBD6Q86V97 674 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 MAGEB18Q96M61 343 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 FERD3LQ96RJ6 166 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SLC24A3Q9HC58 644 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SLC27A6Q9Y2P4 619 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 GYG2O15488 501 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ESR1P03372 595 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 DRD1P21728 446 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 GCKP35557 465 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 MAPRE2Q15555 327 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 TEAD4Q15561 434 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ACAT2Q9BWD1 397 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SEMA4BQ9NPR2 832 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 SPATA6Q9NWH7 488 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 SLC2A6Q9UGQ3 507 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 TCRBV5S1A1TA0A578 114 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ANGPT2O15123 496 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 LINC01565O15544 149 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SMAD6O43541 496 aaKnown RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 FAM107AO95990 144 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 CFIP05156 583 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 GNSP15586 552 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ATP5F1P24539 256 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 HLA-FP30511 346 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SLC6A11P48066 632 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 LIMK2P53671 638 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 NRG1Q02297 640 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 PEX6Q13608 980 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 PTPRCAPQ14761 206 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 NR6A1Q15406 480 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 QPCTQ16769 361 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 LDLRAP1Q5SW96 308 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 UBE2R2Q712K3 238 aaPredicted RBP10.06□□□□□ -0.8
SMG6-213ENST00000573166 UNC5BQ8IZJ1 945 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 DEFB119Q8N690 84 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 SERPINI1Q99574 410 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 CEP44Q9C0F1 390 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 ZDHHC18Q9NUE0 388 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 EPS15L1Q9UBC2 864 aa10.06□□□□□ -0.8
SMG6-213ENST00000573166 FOXO6A8MYZ6 492 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ISM1B1AKI9 464 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SH3BGRLO75368 114 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 SLC1A2P43004 574 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CTSOP43234 321 aaPredicted RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 PIK3CGP48736 1102 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SESN3P58005 492 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 NIPAL4Q0D2K0 466 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CAPRIN1Q14444 709 aaKnown RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 GPNMBQ14956 572 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CYP2A13Q16696 494 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CD300LGQ6UXG3 332 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CHST14Q8NCH0 376 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ASB16Q96NS5 453 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 NELL2Q99435 816 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 RBBP8Q99708 897 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 MRPL57Q9BQC6 102 aaKnown RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 CDH19Q9H159 772 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 LMAN1LQ9HAT1 526 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SLC13A4Q9UKG4 626 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 PSMD13Q9UNM6 376 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CYP8B1Q9UNU6 501 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 PARP14Q460N5 1801 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 BAG2O95816 211 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 EPB42P16452 691 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 HOXD9P28356 352 aaPredicted RBP10.05□□□□□ -0.8
SMG6-213ENST00000573166 ZNF234Q14588 700 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 MUM1Q2TAK8 710 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SH2D4BQ5SQS7 431 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 FSTL4Q6MZW2 842 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ENPP7Q6UWV6 458 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 TRABD2AQ86V40 505 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ADGRG2Q8IZP9 1017 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 CNTD1Q8N815 330 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 OR10G6Q8NH81 332 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ZSCAN5AQ9BUG6 496 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 WDR41Q9HAD4 459 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 PCDH12Q9NPG4 1184 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ADA2Q9NZK5 511 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 INVSQ9Y283 1065 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 BRWD1Q9NSI6 2320 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 LOC100653049A0A140TA62 436 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 GNG14A0A1W2PPG7 69 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 GABBR2O75899 941 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 KRT34O76011 436 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 VIPP01282 170 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SLC1A6P48664 564 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 TAS2R39P59534 338 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 TRAF2Q12933 501 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 SLC5A9Q2M3M2 681 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 PARM1Q6UWI2 310 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 EXOC3L1Q86VI1 746 aa10.05□□□□□ -0.8
SMG6-213ENST00000573166 ZBTB2Q8N680 514 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms