RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 RNF215Q9Y6U7 377 aa9.24□□□□□ -0.93
NPLOC4-210ENST00000572824 CXorf51AA0A1B0GTR3 108 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 EIF4E1BA6NMX2 242 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 TPP1O14773 563 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 MFSD11O43934 449 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 SOD1P00441 154 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 FTLP02792 175 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 TPM2P07951 284 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 PDHA1P08559 390 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 ELFN1P0C7U0 828 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 CR2P20023 1033 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 UGT1A5P35504 534 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 DUSP3P51452 185 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 NDST2P52849 883 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 YPEL5P62699 121 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 NFKB2Q00653 900 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 RAD51Q06609 339 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 ELP6Q0PNE2 266 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 SPIDRQ14159 915 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 PTK2BQ14289 1009 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 IQCB1Q15051 598 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 ACOX1Q15067 660 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 CAVIN1Q6NZI2 390 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 DOK6Q6PKX4 331 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 BNC2Q6ZN30 1099 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 ZNF761Q86XN6 746 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 GOLM1Q8NBJ4 401 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 PDCD6IPQ8WUM4 868 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 CSPG4P5Q96PW8 444 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 RBM15Q96T37 977 aaKnown RBP eCLIP9.23□□□□□ -0.932e-6■□□□□ 9.1
NPLOC4-210ENST00000572824 AGAP2Q99490 1192 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 FUCA2Q9BTY2 467 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 SEMA6CQ9H3T2 930 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 RDH14Q9HBH5 336 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 NOD2Q9HC29 1040 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 SPATS2LQ9NUQ6 558 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 TMEM9Q9P0T7 183 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 PISDQ9UG56 409 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 CD84Q9UIB8 345 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 MOSPD1Q9UJG1 213 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 SPTA1P02549 2419 aa9.23□□□□□ -0.93
NPLOC4-210ENST00000572824 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 PRAMEF33A0A0G2JMD5 474 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ANKRD62A6NC57 917 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ARHGAP42A6NI28 874 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 DAPK3O43293 454 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 PRAMEF10O60809 474 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 TIAF1O95411 115 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 CTSEP14091 401 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 SERPINA4P29622 427 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 SLC5A2P31639 672 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ANP32AP39687 249 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 TMPRSS3P57727 454 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 KIAA1024LP59773 190 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 CYP4F2P78329 520 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 SLC25A11Q02978 314 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 BCL2L1Q07817 233 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 IL10RBQ08334 325 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 MTM1Q13496 603 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 C16orf72Q14CZ0 275 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 SNAP47Q5SQN1 464 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 CFAP58Q5T655 872 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ANKRD34AQ69YU3 496 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ERAP2Q6P179 960 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 BRAT1Q6PJG6 821 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 POLNQ7Z5Q5 900 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 SPRED1Q7Z699 444 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 TAF8Q7Z7C8 310 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 CLEC14AQ86T13 490 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 HEATR4Q86WZ0 1026 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ZFAND4Q86XD8 727 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 JAMLQ86YT9 394 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 RCBTB1Q8NDN9 531 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 GPR156Q8NFN8 814 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 OR56A4Q8NGH8 313 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 BTN2A2Q8WVV5 523 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 JPH3Q8WXH2 748 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 NUS1Q96E22 293 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 COQ10AQ96MF6 247 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ZNF641Q96N77 438 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 GFM1Q96RP9 751 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 NUDT22Q9BRQ3 303 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 PACSIN1Q9BY11 444 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 THAP2Q9H0W7 228 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 LRRN3Q9H3W5 708 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 RETREG1Q9H6L5 497 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 ATP13A3Q9H7F0 1226 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 USP29Q9HBJ7 922 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 PCDH18Q9HCL0 1135 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 THSD1Q9NS62 852 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 PARVAQ9NVD7 372 aa9.22□□□□□ -0.93
NPLOC4-210ENST00000572824 CCDC187A0A096LP49 1063 aa9.21□□□□□ -0.94
NPLOC4-210ENST00000572824 TEX51A0A1B0GUA7 166 aa9.21□□□□□ -0.94
NPLOC4-210ENST00000572824 PRSS38A1L453 326 aa9.21□□□□□ -0.94
NPLOC4-210ENST00000572824 FAM221AA4D161 298 aa9.21□□□□□ -0.94
NPLOC4-210ENST00000572824 GOLGA6CA6NDK9 693 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms