RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 METTL18O95568 372 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 LDOC1O95751 146 aaPredicted RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 EML2O95834 649 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 EPOP01588 193 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 IVLP07476 585 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 CKMT2P17540 419 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 POLD2P49005 469 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 MMP16P51512 607 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 THOP1P52888 689 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 EIF3EP60228 445 aaKnown RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 PPARDQ03181 441 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 PTK2BQ14289 1009 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 TCEA2Q15560 299 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 PCSK7Q16549 785 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 KCTD19Q17RG1 926 aaPredicted RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 ANKRD20A2Q5SQ80 823 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 ANKRD20A1Q5TYW2 823 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 ANKRD20A3Q5VUR7 823 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 DENND2CQ68D51 928 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 BZW1Q7L1Q6 419 aaKnown RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 SLC13A5Q86YT5 568 aaPredicted RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 CDKL3Q8IVW4 592 aaPredicted RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 NRSN1Q8IZ57 195 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 SYCE1Q8N0S2 351 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 DCBLD1Q8N8Z6 715 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 GPBAR1Q8TDU6 330 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 LMX1AQ8TE12 382 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 AP2M1Q96CW1 435 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 TSGA10Q9BZW7 698 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 CARD9Q9H257 536 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 IL17CQ9P0M4 197 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 KLHL8Q9P2G9 620 aaPredicted RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 KLQ9UEF7 1012 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 FAM153AQ9UHL3 310 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 SUFUQ9UMX1 484 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 PLEKHM1Q9Y4G2 1056 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 UNC13CQ8NB66 2214 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 PTPRQQ9UMZ3 2332 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 FAM149AA5PLN7 773 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 USP27XA6NNY8 438 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 H3BM21 787 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 TAF4O00268 1085 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 NTN3O00634 580 aaPredicted RBP8.62□□□□□ -1.03
SMG6-210ENST00000572205 KCNN4O15554 427 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 KRT86O43790 486 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 TJP3O95049 919 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 RASGRP1O95267 797 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 AGTP01019 485 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 GP1BAP07359 652 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 CCDC175P0C221 793 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 CA4P22748 312 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 PSMA3P25788 255 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 HMGCLP35914 325 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ZNF140P52738 457 aaPredicted RBP8.62□□□□□ -1.03
SMG6-210ENST00000572205 MPP3Q13368 585 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ILKQ13418 452 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ARHGEF7Q14155 803 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 HLTFQ14527 1009 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMG6-210ENST00000572205 PTPRCAPQ14761 206 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 NR1D2Q14995 579 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 PYCR3Q53H96 274 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 RAET1GQ6H3X3 334 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ENPP7Q6UWV6 458 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 UNQ6494/PRO21346Q6UXR6 183 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 KDELC2Q7Z4H8 507 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ZNF438Q7Z4V0 828 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 C11orf96Q7Z7L8 435 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 PRUNE1Q86TP1 453 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 HID1Q8IV36 788 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ZNF547Q8IVP9 402 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 FSTL5Q8N475 847 aaPredicted RBP8.62□□□□□ -1.03
SMG6-210ENST00000572205 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
SMG6-210ENST00000572205 BTN2A2Q8WVV5 523 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 TMEM121Q9BTD3 319 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 ARNT2Q9HBZ2 717 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 LZTFL1Q9NQ48 299 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 KCTD5Q9NXV2 234 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 SPASTQ9UBP0 616 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 RSPH14Q9UHP6 348 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 TRHDEQ9UKU6 1024 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 SHOC2Q9UQ13 582 aa8.62□□□□□ -1.03
SMG6-210ENST00000572205 APOBEC2Q9Y235 224 aaKnown RBP8.62□□□□□ -1.03
SMG6-210ENST00000572205 PMS2P1A4D2B8 440 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 RGSL1A5PLK6 1076 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 AGAP14A8MT82 685 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 H7C0C1 242 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
SMG6-210ENST00000572205 CHUKO15111 745 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 INPP4BO15327 924 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 SGTAO43765 313 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 USP12O75317 370 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 SNRNP200O75643 2136 aaKnown RBP8.61□□□□□ -1.03
SMG6-210ENST00000572205 RECKO95980 971 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 ATP1A1P05023 1023 aaKnown RBP8.61□□□□□ -1.03
SMG6-210ENST00000572205 FGF1P05230 155 aa8.61□□□□□ -1.03
SMG6-210ENST00000572205 HLA-DPA1P20036 260 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms