RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TLK1Q9UKI8 766 aa19.67■□□□□ 0.74
CCDC40-206ENST00000572083 CDC14CA4D256 554 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 DNAJC6O75061 913 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 KATNA1O75449 491 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 PDGFAP04085 211 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 ACP5P13686 325 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 MIPP30301 263 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 PTSQ03393 145 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 MAMLD1Q13495 774 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 ACAD10Q6JQN1 1059 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 IYDQ6PHW0 289 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 C6orf15Q6UXA7 325 aaPredicted RBP19.66■□□□□ 0.74
CCDC40-206ENST00000572083 SLC9B2Q86UD5 537 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 BBS5Q8N3I7 341 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 NEK11Q8NG66 645 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 SH3KBP1Q96B97 665 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 RIOK2Q9BVS4 552 aaKnown RBP19.66■□□□□ 0.74
CCDC40-206ENST00000572083 PPIL1Q9Y3C6 166 aa19.66■□□□□ 0.74
CCDC40-206ENST00000572083 MN1Q10571 1320 aaPredicted RBP19.66■□□□□ 0.74
CCDC40-206ENST00000572083 ZNF106Q9H2Y7 1883 aaKnown RBP19.66■□□□□ 0.74
CCDC40-206ENST00000572083 A6NCN8 305 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 TTLL8A6PVC2 850 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 TMCO5BA8MYB1 307 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 MAFKO60675 156 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 DNAJB5O75953 348 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 TPM2P07951 284 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 MMP13P45452 471 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 FHL5Q5TD97 284 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 ZNF765Q7L2R6 523 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 ATPAF2Q8N5M1 289 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 EFCAB3Q8N7B9 438 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 EXD1Q8NHP7 514 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 STAMBPL1Q96FJ0 436 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 ELMO2Q96JJ3 720 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 HERPUD2Q9BSE4 406 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-206ENST00000572083 ZWILCHQ9H900 591 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 PARVAQ9NVD7 372 aa19.65■□□□□ 0.74
CCDC40-206ENST00000572083 RNF8O76064 485 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 KIAA0754O94854 1291 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 PYGLP06737 847 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 ANKRD34CP0C6C1 535 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 RNF224P0DH78 156 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 F3P13726 295 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 HCAR3P49019 387 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 SEPHS1P49903 392 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 PMS2P54278 862 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 SH3BP2P78314 561 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 CDKAL1Q5VV42 579 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 PLXDC1Q8IUK5 500 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 CPT1CQ8TCG5 803 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 SSC4DQ8WTU2 575 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 OR6C1Q96RD1 312 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 TWSG1Q9GZX9 223 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 NT5MQ9NPB1 228 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 VPS18Q9P253 973 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 CPNE7Q9UBL6 633 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 ITPR2Q14571 2701 aa19.64■□□□□ 0.73
CCDC40-206ENST00000572083 TNRC6AQ8NDV7 1962 aaKnown RBP19.63■□□□□ 0.73
CCDC40-206ENST00000572083 A0A0J9YYE9 177 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 A1L4Q6 167 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 LRCH4O75427 683 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 TRBC1P01850 177 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 ZNF30P17039 623 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 AMPD1P23109 780 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 STC1P52823 247 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 RALGPS1Q5JS13 557 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 MARC1Q5VT66 337 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 TMCO3Q6UWJ1 677 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 LYSMD3Q7Z3D4 306 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 RASGRP3Q8IV61 690 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 NDUFAF2Q8N183 169 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.63■□□□□ 0.73
CCDC40-206ENST00000572083 GALNT11Q8NCW6 608 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 NSMCE1Q8WV22 266 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 C9orf72Q96LT7 481 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 TGM7Q96PF1 710 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 EPB41L1Q9H4G0 881 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 OGFRQ9NZT2 677 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 RCOR3Q9P2K3 495 aaPredicted RBP19.63■□□□□ 0.73
CCDC40-206ENST00000572083 LNPEPQ9UIQ6 1025 aa19.63■□□□□ 0.73
CCDC40-206ENST00000572083 KIR2DS5A0A0G2JLQ3 304 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 A0A0G2JNG1 304 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 LILRA5A6NI73 299 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 H3BRJ5 948 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 KIR2DS3K7RE56 304 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 FZD6O60353 706 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 SEMA7AO75326 666 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 NDUFA10O95299 355 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 C9P02748 559 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 SLC2A4P14672 509 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 TYRP1P17643 537 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 ZNF135P52742 658 aaPredicted RBP19.62■□□□□ 0.73
CCDC40-206ENST00000572083 EPHB1P54762 984 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 KIR2DS5Q14953 304 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 SMTNL2Q2TAL5 461 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 PLEKHA7Q6IQ23 1121 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 NLRP8Q86W28 1048 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 PSTKQ8IV42 348 aaKnown RBP19.62■□□□□ 0.73
CCDC40-206ENST00000572083 TRIM55Q9BYV6 548 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms