RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 PKD2L2Q9NZM6 624 aa20.9■□□□□ 0.94
PKD1-240ENST00000570253 AMACRQ9UHK6 382 aa20.9■□□□□ 0.94
PKD1-240ENST00000570253 SMTNL1A8MU46 457 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 DDX3XO00571 662 aaKnown RBP eCLIP20.89■□□□□ 0.93
PKD1-240ENST00000570253 FZD6O60353 706 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 PRKAR1AP10644 381 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 STC1P52823 247 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 RPL26P61254 145 aaKnown RBP20.89■□□□□ 0.93
PKD1-240ENST00000570253 CDC20Q12834 499 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 NCAPHQ15003 741 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.89■□□□□ 0.93
PKD1-240ENST00000570253 PHYKPLQ8IUZ5 450 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.89■□□□□ 0.93
PKD1-240ENST00000570253 COX14Q96I36 57 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 CTRCQ99895 268 aa20.89■□□□□ 0.93
PKD1-240ENST00000570253 RPL26L1Q9UNX3 145 aaKnown RBP20.89■□□□□ 0.93
PKD1-240ENST00000570253 PTPN13Q12923 2485 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 KIR2DS5A0A0G2JLQ3 304 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 A0A0G2JNG1 304 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 KIR2DS3K7RE56 304 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 POLR1CO15160 346 aaPredicted RBP20.88■□□□□ 0.93
PKD1-240ENST00000570253 SNX2O60749 519 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 CASRP41180 1078 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 KIR2DS5Q14953 304 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 PTPRRQ15256 657 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 SKIDA1Q1XH10 827 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 LYSMD3Q7Z3D4 306 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 ARHGAP22Q7Z5H3 698 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 PLXDC1Q8IUK5 500 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 ESX1Q8N693 406 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 BMPERQ8N8U9 685 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 LPCAT1Q8NF37 534 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 APOBEC4Q8WW27 367 aaKnown RBP20.88■□□□□ 0.93
PKD1-240ENST00000570253 TDRD1Q9BXT4 1180 aaKnown RBP20.88■□□□□ 0.93
PKD1-240ENST00000570253 ISCUQ9H1K1 167 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 EPN3Q9H201 632 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 KLHL3Q9UH77 587 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 ANAPC7Q9UJX3 599 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 CHKBQ9Y259 395 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 PCDHB3Q9Y5E6 796 aa20.88■□□□□ 0.93
PKD1-240ENST00000570253 A0A0U1RQS6 177 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 C1orf232A0A0U1RR37 186 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 MATN3O15232 486 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 STK17BO94768 372 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 ATP1A1P05023 1023 aaKnown RBP20.87■□□□□ 0.93
PKD1-240ENST00000570253 ACP5P13686 325 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 TCN2P20062 427 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 GARSP41250 739 aaKnown RBP20.87■□□□□ 0.93
PKD1-240ENST00000570253 IFI16Q16666 785 aaKnown RBP20.87■□□□□ 0.93
PKD1-240ENST00000570253 ANKRD20A8PQ5CZ79 823 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 CCDC183Q5T5S1 534 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 IYDQ6PHW0 289 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 RFLNAQ6ZTI6 216 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 NIPA2Q8N8Q9 360 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 AGAP2Q99490 1192 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 FAM83DQ9H4H8 585 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 PCDH9Q9HC56 1237 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 RBM22Q9NW64 420 aaKnown RBP eCLIP20.87■□□□□ 0.93
PKD1-240ENST00000570253 KCNK6Q9Y257 313 aa20.87■□□□□ 0.93
PKD1-240ENST00000570253 BZW2Q9Y6E2 419 aaKnown RBP20.87■□□□□ 0.93
PKD1-240ENST00000570253 RGSL1A5PLK6 1076 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 CYSRT1A8MQ03 144 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 NKX2-8O15522 239 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 DNAJC6O75061 913 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 CLDN7O95471 211 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 F3P13726 295 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 TCF4P15884 667 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 DSC2Q02487 901 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 C16orf46Q6P387 395 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 STARD8Q92502 1023 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 HSD3B7Q9H2F3 369 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 TBC1D29Q9UFV1 150 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 PRKAB1Q9Y478 270 aa20.86■□□□□ 0.93
PKD1-240ENST00000570253 TMEM184BQ9Y519 407 aaPredicted RBP20.86■□□□□ 0.93
PKD1-240ENST00000570253 LOC101059948A0A1B0GTJ6 334 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MYO1FO00160 1098 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MFSD11O43934 449 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MTA2O94776 668 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MBD3O95983 291 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 SKILP12757 684 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MX2P20592 715 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 CCNCP24863 283 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 TYRO3Q06418 890 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 GALNT2Q10471 571 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MAP7Q14244 749 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 DEFB109BQ30KR1 87 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 ALG1LQ6GMV1 187 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MAP7D3Q8IWC1 876 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 TRIM48Q8IWZ4 208 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 MAML1Q92585 1016 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 ZNF830Q96NB3 372 aaPredicted RBP20.85■□□□□ 0.93
PKD1-240ENST00000570253 LYSMD1Q96S90 227 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 NUP85Q9BW27 656 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 CARD9Q9H257 536 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 ZNF71Q9NQZ8 489 aaPredicted RBP20.85■□□□□ 0.93
PKD1-240ENST00000570253 ANKMY1Q9P2S6 941 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 KCTD3Q9Y597 815 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 BSNQ9UPA5 3926 aa20.85■□□□□ 0.93
PKD1-240ENST00000570253 LILRA5A6NI73 299 aa20.84■□□□□ 0.93
PKD1-240ENST00000570253 GRID2O43424 1007 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms