RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 JADE1Q6IE81 842 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TRAT1Q6PIZ9 186 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CWC27Q6UX04 472 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CYB5R4Q7L1T6 521 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CATSPER4Q7RTX7 472 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 DTX2Q86UW9 622 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 RHPN2Q8IUC4 686 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 KBTBD2Q8IY47 623 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CCAR2Q8N163 923 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CPXM2Q8N436 756 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SPC24Q8NBT2 197 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FBXO15Q8NCQ5 510 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SMRP1Q8NCR6 262 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PRSS33Q8NF86 280 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 GLG1Q92896 1179 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PTP4A1Q93096 173 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CTHRC1Q96CG8 243 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TMCO6Q96DC7 493 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PRR11Q96HE9 360 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 LCORQ96JN0 433 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FER1L6-AS2Q96M78 137 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 LZTS2Q9BRK4 669 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ELOVL1Q9BW60 279 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SGPP1Q9BX95 441 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SPZ1Q9BXG8 430 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 HEMGNQ9BXL5 484 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FTHL17Q9BXU8 183 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TRIM31Q9BZY9 425 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 RWDD1Q9H446 243 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ST6GALNAC4Q9H4F1 302 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CDCP1Q9H5V8 836 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SAP30LQ9HAJ7 183 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 GLOD4Q9HC38 313 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 GCM1Q9NP62 436 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SNX15Q9NRS6 342 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 C20orf141Q9NUB4 165 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ADPRHL2Q9NX46 363 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ERAP1Q9NZ08 941 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FBXL17Q9UF56 701 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SEC63Q9UGP8 760 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 MUTYHQ9UIF7 546 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 HAO1Q9UJM8 370 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TUBE1Q9UJT0 475 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ANAPC2Q9UJX6 822 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 MKLN1Q9UL63 735 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PPIEQ9UNP9 301 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TRIOO75962 3097 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PTPRZ1P23471 2315 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 DOCK5Q9H7D0 1870 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FAM186AA6NE01 2351 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 IGSF9BQ9UPX0 1349 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 KMT2EQ8IZD2 1858 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 GVINP1Q7Z2Y8 2422 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 A0A0U1RQK1 487 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 GSTTP1A0A1W2PQM5 241 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 TCRBV21S2A2A0A5A6 115 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ERICH2A1L162 156 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ZNF320A2RRD8 509 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 SH3D21A4FU49 640 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 M0QZ92 97 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 LEFTY2O00292 366 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 MEIS2O14770 477 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 IFIT3O14879 490 aaKnown RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ADAMDEC1O15204 470 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 PPM1DO15297 605 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 LINC01565O15544 149 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CEP104O60308 925 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CDC14BO60729 498 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ATP9AO75110 1047 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 PMPCBO75439 489 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 SEC31AO94979 1220 aaKnown RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 KAT7O95251 611 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 IPO7O95373 1038 aaKnown RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 IGHDP01880 384 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ERBB2P04626 1255 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 TMIGD3P0DMS9 266 aaPredicted RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 PKMP14618 531 aaKnown RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CREB1P16220 341 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 HLA-DPA1P20036 260 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 MATN1P21941 496 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 PTAFRP25105 342 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 DNAJB1P25685 340 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CD52P31358 61 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 KIF5BP33176 963 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ZNF131P52739 623 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 POLGP54098 1239 aaPredicted RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CYP4A11Q02928 519 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 OCA2Q04671 838 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 DEUP1Q05D60 604 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 SIGLEC14Q08ET2 396 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 MESP2Q0VG99 397 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ALCAMQ13740 583 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 IL13RA2Q14627 380 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 GRM7Q14831 915 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 ELAVL1Q15717 326 aaKnown RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 AP5B1Q2VPB7 878 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 GXYLT1Q4G148 440 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CST9LP1Q5W188 147 aa3.27□□□□□ -1.89
CNOT1-221ENST00000569924 KIAA0930Q6ICG6 404 aaPredicted RBP3.27□□□□□ -1.89
CNOT1-221ENST00000569924 CAVIN1Q6NZI2 390 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms