RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 CILP2Q8IUL8 1156 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 OTUD6BQ8N6M0 293 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 C2CD4AQ8NCU7 369 aaPredicted RBP12.42□□□□□ -0.42
EDC3-217ENST00000569606 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
EDC3-217ENST00000569606 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 SCG3Q8WXD2 468 aaKnown RBP12.42□□□□□ -0.42
EDC3-217ENST00000569606 CENPTQ96BT3 561 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 SPACA7Q96KW9 195 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 PAFAH2Q99487 392 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 KLF6Q99612 283 aaPredicted RBP12.42□□□□□ -0.42
EDC3-217ENST00000569606 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 ZSCAN5AQ9BUG6 496 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 COL25A1Q9BXS0 654 aaPredicted RBP12.42□□□□□ -0.42
EDC3-217ENST00000569606 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 MBNL1Q9NR56 388 aaKnown RBP12.42□□□□□ -0.42
EDC3-217ENST00000569606 NSMCE4AQ9NXX6 385 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 CRLS1Q9UJA2 301 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 FBXO5Q9UKT4 447 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 TMPRSS11EQ9UL52 423 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 PSAT1Q9Y617 370 aa12.42□□□□□ -0.42
EDC3-217ENST00000569606 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 K7ESM1 405 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 MAP2K7O14733 419 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 RAD51BO15315 384 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 SLC31A1O15431 190 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 NDUFS2O75306 463 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 FAM155BO75949 473 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 SASH3O75995 380 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 S1PR4O95977 384 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 AHSGP02765 367 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 IVLP07476 585 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 GABRB3P28472 473 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 GPR1P46091 355 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 LEPRP48357 1165 aaKnown RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 EIF3BP55884 814 aaKnown RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 MPP1Q00013 466 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 CSTF1Q05048 431 aaKnown RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 ZNF844Q08AG5 666 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 DBN1Q16643 649 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 AARS2Q5JTZ9 985 aaKnown RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 RAET1GQ6H3X3 334 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 PNCKQ6P2M8 343 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 PACS1Q6VY07 963 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 CERS6Q6ZMG9 384 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 STRA8Q7Z7C7 330 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 GALNT7Q86SF2 657 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 SDCCAG8Q86SQ7 713 aaPredicted RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 LONP2Q86WA8 852 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 SERPINA9Q86WD7 417 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 NXPE1Q8N323 547 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 PLA2G15Q8NCC3 412 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 DCAKDQ8WVC6 231 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.41□□□□□ -0.42
EDC3-217ENST00000569606 ULK4Q96C45 1275 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 BIRC7Q96CA5 298 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 VPS35Q96QK1 796 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 CPNE1Q99829 537 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 MCMBPQ9BTE3 642 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 TMEM109Q9BVC6 243 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 C1QTNF7Q9BXJ2 289 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 ROPN1BQ9BZX4 212 aaPredicted RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 PCED1AQ9H1Q7 454 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 VIPAS39Q9H9C1 493 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 PPCSQ9HAB8 311 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 ROPN1Q9HAT0 212 aaPredicted RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 FBXO6Q9NRD1 293 aaPredicted RBP12.41□□□□□ -0.42
EDC3-217ENST00000569606 SMOXQ9NWM0 555 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 SLC24A2Q9UI40 661 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 FBXO4Q9UKT5 387 aa12.41□□□□□ -0.42
EDC3-217ENST00000569606 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 RASGRF2O14827 1237 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 GPR37L1O60883 481 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 HAUS5O94927 633 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 FSBPO95073 299 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 PCCBP05166 539 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 PYGLP06737 847 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 INHBAP08476 426 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 BCKDHBP21953 392 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 HNRNPA2B1P22626 353 aaKnown RBP12.4□□□□□ -0.42
EDC3-217ENST00000569606 ACRV1P26436 265 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 TEAD1P28347 426 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 PMLP29590 882 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 IGFALSP35858 605 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 GP5P40197 560 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 MSH2P43246 934 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 TTPAP49638 278 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 CSE1LP55060 971 aaKnown RBP12.4□□□□□ -0.42
EDC3-217ENST00000569606 RASA2Q15283 850 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 ZNF789Q5FWF6 425 aa12.4□□□□□ -0.42
EDC3-217ENST00000569606 GPRC6AQ5T6X5 926 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms