RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GLOD4Q9HC38 313 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.42□□□□□ -0.1
COMMD4-225ENST00000569245 GPR34Q9UPC5 381 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 CLCA2Q9UQC9 943 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 V9GYY5 206 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-225ENST00000569245 IGF2RP11717 2491 aa14.42□□□□□ -0.1
COMMD4-225ENST00000569245 LY6G6EA0A0G2JKS1 128 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 OPA1O60313 960 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 MT-CO3P00414 261 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 PTPN3P26045 913 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-225ENST00000569245 STC1P52823 247 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 DRG2P55039 364 aaKnown RBP14.41□□□□□ -0.1
COMMD4-225ENST00000569245 CDK3Q00526 305 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 SLC7A5Q01650 507 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 DPTQ07507 201 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 KCTD16Q68DU8 428 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 DUPD1Q68J44 220 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 DOK6Q6PKX4 331 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 SLC35F3Q8IY50 421 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 SDR16C5Q8N3Y7 309 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 FAM46DQ8NEK8 389 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 SPATA22Q8NHS9 363 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 MDM1Q8TC05 714 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 SCAMP4Q969E2 229 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 TEKT5Q96M29 485 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 VAT1Q99536 393 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 TRIM51Q9BSJ1 452 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 TEX101Q9BY14 249 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 CARS2Q9HA77 564 aaKnown RBP14.41□□□□□ -0.1
COMMD4-225ENST00000569245 KLHL8Q9P2G9 620 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-225ENST00000569245 PADI4Q9UM07 663 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 UTP11Q9Y3A2 253 aaKnown RBP14.41□□□□□ -0.1
COMMD4-225ENST00000569245 U3KQA8 63 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 WDFY3Q8IZQ1 3526 aa14.41□□□□□ -0.1
COMMD4-225ENST00000569245 PRSS38A1L453 326 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 PMPCBO75439 489 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 STK10O94804 968 aaKnown RBP14.4□□□□□ -0.1
COMMD4-225ENST00000569245 IFNB1P01574 187 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 SLC4A1P02730 911 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 TUBBP07437 444 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 ETS1P14921 441 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 ACTN2P35609 894 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 POLD2P49005 469 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 CDK18Q07002 472 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 CYP4F3Q08477 520 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 WASHC5Q12768 1159 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 NRSN1Q8IZ57 195 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 ARL10Q8N8L6 244 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 GLIS1Q8NBF1 620 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 NAT6Q93015 286 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 RIOK2Q9BVS4 552 aaKnown RBP14.4□□□□□ -0.1
COMMD4-225ENST00000569245 TMEM168Q9H0V1 697 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 UBP1Q9NZI7 540 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 PKD2L2Q9NZM6 624 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 PAK5Q9P286 719 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 AK5Q9Y6K8 562 aa14.4□□□□□ -0.1
COMMD4-225ENST00000569245 TDRD6O60522 2096 aaKnown RBP14.4□□□□□ -0.1
COMMD4-225ENST00000569245 ARID1BQ8NFD5 2236 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 EME2A4GXA9 379 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 F5H423 210 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 INPP4BO15327 924 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 MT-CYBP00156 380 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 CEACAM5P06731 702 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 PYGLP06737 847 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 PIRTP0C851 137 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 ZSCAN5DPP0CG00 497 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 IVDP26440 423 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 TEAD1P28347 426 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 RPL22P35268 128 aaKnown RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 GNPDA1P46926 289 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 GUCY2DQ02846 1103 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 CAMK2BQ13554 666 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-225ENST00000569245 WDR93Q6P2C0 686 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 ADAMTSL4Q6UY14 1074 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 ZNF765Q7L2R6 523 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 PID1Q7Z2X4 250 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 IFT20Q8IY31 132 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 DCBLD1Q8N8Z6 715 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 KYQ8NBH2 561 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 HIC2Q96JB3 615 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 SPATA13Q96N96 652 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 DEPDC7Q96QD5 511 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 LYSMD1Q96S90 227 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 DPEP2Q9H4A9 486 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 FAM83DQ9H4H8 585 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 SYNDIG1Q9H7V2 258 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 ZFYVE1Q9HBF4 777 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 EPB41L5Q9HCM4 733 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 ASIC3Q9UHC3 531 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 TRHDEQ9UKU6 1024 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 SUFUQ9UMX1 484 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 SHOC2Q9UQ13 582 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 TMEM98Q9Y2Y6 226 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 GPSM3Q9Y4H4 160 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 DMXL2Q8TDJ6 3036 aa14.39□□□□□ -0.11
COMMD4-225ENST00000569245 USP24Q9UPU5 2620 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms