RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 BBS5Q8N3I7 341 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CISD2Q8N5K1 135 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 ARFGAP1Q8N6T3 406 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 RBMXL3Q8N7X1 1067 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 NETO2Q8NC67 525 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 ST6GALNAC3Q8NDV1 305 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 FDCSPQ8NFU4 85 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 NELFBQ8WX92 580 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 RXFP2Q8WXD0 754 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CENPIQ92674 756 aaPredicted RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 AP2M1Q96CW1 435 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 C19orf60Q96EN9 201 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 ELMO2Q96JJ3 720 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 IP6K3Q96PC2 410 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 TGM7Q96PF1 710 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 KLC2Q9H0B6 622 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 ILKAPQ9H0C8 392 aaPredicted RBP8.58□□□□□ -1.04
SMG1-216ENST00000569122 PDFQ9HBH1 243 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 CHST11Q9NPF2 352 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 PLCB1Q9NQ66 1216 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 LUZP4Q9P127 313 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 VPS18Q9P253 973 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 DNPEPQ9ULA0 475 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 NEU3Q9UQ49 428 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 TMEM98Q9Y2Y6 226 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 PLEKHM1Q9Y4G2 1056 aa8.58□□□□□ -1.04
SMG1-216ENST00000569122 F8P00451 2351 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 PRRC2CQ9Y520 2896 aaKnown RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 GOLGA6L4A6NEF3 574 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 J3KR12 359 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 LRRTM2O43300 516 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 HTRA2O43464 458 aaPredicted RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 KRT86O43790 486 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 CREB3O43889 395 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SNX2O60749 519 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 CPP00450 1065 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 VIPP01282 170 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 NELFEP18615 380 aaKnown RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 SLC9A1P19634 815 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 CLCNKAP51800 687 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 VAV2P52735 878 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SH3BP2P78314 561 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 CHAF1BQ13112 559 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 PAK1Q13153 545 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 ART3Q13508 389 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 C15orf59Q2T9L4 293 aaPredicted RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 RALGPS1Q5JS13 557 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 CACHD1Q5VU97 1274 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 IZUMO3Q5VZ72 239 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 TRNP1Q6NT89 227 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 GJB7Q6PEY0 223 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 Q6ZVL8 140 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 MARK2Q7KZI7 788 aaKnown RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 ZNF765Q7L2R6 523 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 CHST15Q7LFX5 561 aaPredicted RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 PHLDB2Q86SQ0 1253 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SIDT2Q8NBJ9 832 aaKnown RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 OR8K5Q8NH50 307 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 COG1Q8WTW3 980 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 FAM172AQ8WUF8 416 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 KLHL6Q8WZ60 621 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 UBXN4Q92575 508 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SCRN2Q96FV2 425 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SGSM3Q96HU1 749 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 AGAP3Q96P47 875 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 BARD1Q99728 777 aaKnown RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 TBC1D10AQ9BXI6 508 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 LRRC19Q9H756 370 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SP110Q9HB58 689 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 WASH6PQ9NQA3 447 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 COPG2Q9UBF2 871 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 EPHA6Q9UF33 1036 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 TBC1D29Q9UFV1 150 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 DNAJC12Q9UKB3 198 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 SNX7Q9UNH6 387 aa8.57□□□□□ -1.04
SMG1-216ENST00000569122 KLF2Q9Y5W3 355 aaPredicted RBP8.57□□□□□ -1.04
SMG1-216ENST00000569122 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 C2CD4BA6NLJ0 364 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 EIF3CLB5ME19 914 aaKnown RBP8.56□□□□□ -1.04
SMG1-216ENST00000569122 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 ZNF185O15231 689 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 CPNE3O75131 537 aaKnown RBP8.56□□□□□ -1.04
SMG1-216ENST00000569122 RAB40ALP0C0E4 278 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 KRT3P12035 628 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 ZNF30P17039 623 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 XRCC1P18887 633 aaPredicted RBP8.56□□□□□ -1.04
SMG1-216ENST00000569122 CAPN3P20807 821 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 PON1P27169 355 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 PTGIRP43119 386 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 ARL4DP49703 201 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 PAPOLAP51003 745 aaKnown RBP8.56□□□□□ -1.04
SMG1-216ENST00000569122 GFERP55789 205 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 HDAC4P56524 1084 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 GSDMDP57764 484 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 IL10RBQ08334 325 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 TUBB3Q13509 450 aa8.56□□□□□ -1.04
SMG1-216ENST00000569122 PLEKHN1Q494U1 663 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms