RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CYLC1P35663 651 aaPredicted RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 ACTR1BP42025 376 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 MLLT3P42568 568 aaPredicted RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 FASLGP48023 281 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 INHBCP55103 352 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ACTR1AP61163 376 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 CDK18Q07002 472 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 LRP8Q14114 963 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 TFDP2Q14188 446 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 NOMO1Q15155 1222 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 PCSK7Q16549 785 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 SOWAHCQ53LP3 525 aaPredicted RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 KAZNQ674X7 775 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 MARK2Q7KZI7 788 aaKnown RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 TMC3Q7Z5M5 1100 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ZNF567Q8N184 647 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ARL14Q8N4G2 192 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 GPR26Q8NDV2 337 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ZNF248Q8NDW4 579 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ACRBPQ8NEB7 543 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 WDR36Q8NI36 951 aaKnown RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 SLC37A2Q8TED4 501 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 TFB1MQ8WVM0 346 aaKnown RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 ALG3Q92685 438 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 HAUS1Q96CS2 278 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 RBM41Q96IZ5 413 aaKnown RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 MRGPRX2Q96LB1 330 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 NUDT22Q9BRQ3 303 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 MAK16Q9BXY0 300 aaKnown RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 ADGRE3Q9BY15 652 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 FAM83DQ9H4H8 585 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 SYNDIG1Q9H7V2 258 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 MAGEE1Q9HCI5 957 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 THSD1Q9NS62 852 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 PKD2L2Q9NZM6 624 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 SEPT10Q9P0V9 454 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 LRIT1Q9P2V4 623 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ACSL6Q9UKU0 697 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 TMPRSS11EQ9UL52 423 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 SHOC2Q9UQ13 582 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 EPN1Q9Y6I3 576 aaPredicted RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 A0A0U1RQJ8 604 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 GRID2IPA4D2P6 1211 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 APOC4-APOC2K7ER74 178 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 GAPDHSO14556 408 aaPredicted RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 PLD2O14939 933 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 PPM1DO15297 605 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 RRP8O43159 456 aaKnown RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 B4GAT1O43505 415 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 PMPCBO75439 489 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 ZRANB2O95218 330 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDH3-209ENST00000569080 APOC2P02655 101 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 SLC4A1P02730 911 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 HGFP14210 728 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 BPIP17213 487 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 CTNNA2P26232 953 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 UGT1A5P35504 534 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 CHRNA4P43681 627 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 VAV2P52735 878 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 WNT3AP56704 352 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 CFHR1Q03591 330 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 CCDC173Q0VFZ6 552 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 EIF3IQ13347 325 aaKnown RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 SPA17Q15506 151 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 KHDC1Q4VXA5 237 aaKnown RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 ZNF569Q5MCW4 686 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 ALS2CLQ60I27 953 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 PDPK2PQ6A1A2 396 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 ZNF574Q6ZN55 896 aaPredicted RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 KDELC2Q7Z4H8 507 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 DAAM2Q86T65 1068 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 ZC3H18Q86VM9 953 aaKnown RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 GALNT13Q8IUC8 556 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 TMTC1Q8IUR5 882 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 RCOR2Q8IZ40 523 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 SFRP1Q8N474 314 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 TTC30BQ8N4P2 665 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 TRAM1L1Q8N609 369 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 Q8N9G6 341 aaPredicted RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 SNRNP27Q8WVK2 155 aaKnown RBP7.75□□□□□ -1.17
CDH3-209ENST00000569080 HTR3CQ8WXA8 447 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 P3H4Q92791 437 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 TMEM74Q96NL1 305 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 FCRL5Q96RD9 977 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 CARD9Q9H257 536 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 ZFYVE1Q9HBF4 777 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 RDH14Q9HBH5 336 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 EPB41L5Q9HCM4 733 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 UBP1Q9NZI7 540 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 TBC1D29Q9UFV1 150 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 EFR3BQ9Y2G0 817 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 PRKAB1Q9Y478 270 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 PCDHGA7Q9Y5G6 932 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 PCDHA3Q9Y5H8 950 aa7.75□□□□□ -1.17
CDH3-209ENST00000569080 FASNP49327 2511 aaKnown RBP7.74□□□□□ -1.17
CDH3-209ENST00000569080 IGHV1OR21-1A0A087WYE8 117 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 HACD1B0YJ81 288 aa7.74□□□□□ -1.17
CDH3-209ENST00000569080 F5H423 210 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms