RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ZNF662Q6ZS27 426 aa25■■□□□ 1.59
FANCA-228ENST00000567943 IPMKQ8NFU5 416 aa25■■□□□ 1.59
FANCA-228ENST00000567943 HIC2Q96JB3 615 aa25■■□□□ 1.59
FANCA-228ENST00000567943 MRGPRX2Q96LB1 330 aa25■■□□□ 1.59
FANCA-228ENST00000567943 GPR63Q9BZJ6 419 aa25■■□□□ 1.59
FANCA-228ENST00000567943 GBA3Q9H227 469 aa25■■□□□ 1.59
FANCA-228ENST00000567943 FAM83DQ9H4H8 585 aa25■■□□□ 1.59
FANCA-228ENST00000567943 TRNAU1APQ9NX07 287 aaKnown RBP25■■□□□ 1.59
FANCA-228ENST00000567943 PLEKHM1Q9Y4G2 1056 aa25■■□□□ 1.59
FANCA-228ENST00000567943 ENTPD2Q9Y5L3 495 aa25■■□□□ 1.59
FANCA-228ENST00000567943 LOC285095A0A1B0GVY8 99 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 TCRBV7S2A1N4TA0A589 114 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 RGSL1A5PLK6 1076 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 FADS2P1A8MWK0 482 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 INPP4BO15327 924 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 PYGLP06737 847 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 MPP3Q13368 585 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 HLTFQ14527 1009 aaKnown RBP eCLIP24.99■■□□□ 1.59
FANCA-228ENST00000567943 ANKRD20A2Q5SQ80 823 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 ANKRD20A1Q5TYW2 823 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 ANKRD20A3Q5VUR7 823 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 C19orf48Q6RUI8 117 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 RBM44Q6ZP01 1051 aaKnown RBP24.99■■□□□ 1.59
FANCA-228ENST00000567943 SLC25A41Q8N5S1 370 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 SPO11Q9Y5K1 396 aa24.99■■□□□ 1.59
FANCA-228ENST00000567943 OAS3Q9Y6K5 1087 aaKnown RBP24.99■■□□□ 1.59
FANCA-228ENST00000567943 A0A1W2PQM1 296 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 B4DGG1 531 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 TCEA3O75764 348 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 EPOP01588 193 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 MPOP05164 745 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 FGF1P05230 155 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 ADCY8P40145 1251 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 CHRNA4P43681 627 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 CTBSQ01459 385 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 SIRPB2Q5JXA9 342 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 CERCAMQ5T4B2 595 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 SEL1L2Q5TEA6 688 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 TMC3Q7Z5M5 1100 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 C17orf82Q86X59 251 aaPredicted RBP24.98■■□□□ 1.59
FANCA-228ENST00000567943 CCDC110Q8TBZ0 833 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 UBE2Q2Q8WVN8 375 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 ATXN7L3BQ96GX2 97 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 ALS2CR12Q96Q35 445 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 DPEP2Q9H4A9 486 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 TAAR2Q9P1P5 351 aa24.98■■□□□ 1.59
FANCA-228ENST00000567943 R3HDM2Q9Y2K5 976 aaKnown RBP24.98■■□□□ 1.59
FANCA-228ENST00000567943 A0A087WV48 116 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 PMS2P1A4D2B8 440 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 PSMB4P28070 264 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 GEMP55040 296 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 CCL7P80098 99 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 RPS6KA1Q15418 735 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 C14orf28Q4W4Y0 310 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 MEI1Q5TIA1 1274 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 ALS2CLQ60I27 953 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 SPATA13Q96N96 652 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 SRPK1Q96SB4 655 aaKnown RBP24.97■■□□□ 1.59
FANCA-228ENST00000567943 GORASP1Q9BQQ3 440 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 FSD1LQ9BXM9 530 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 APPL1Q9UKG1 709 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 PPP2R2CQ9Y2T4 447 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 RNF215Q9Y6U7 377 aa24.97■■□□□ 1.59
FANCA-228ENST00000567943 AURKAO14965 403 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 ANXA9O76027 345 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 ATP1A1P05023 1023 aaKnown RBP24.96■■□□□ 1.59
FANCA-228ENST00000567943 GLB1P16278 677 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 SLC1A5Q15758 541 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 PYCR3Q53H96 274 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 SLC30A9Q6PML9 568 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 MARK2Q7KZI7 788 aaKnown RBP24.96■■□□□ 1.59
FANCA-228ENST00000567943 GPR26Q8NDV2 337 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 PATE1Q8WXA2 126 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 GSDMCQ9BYG8 508 aa24.96■■□□□ 1.59
FANCA-228ENST00000567943 DNAJC6O75061 913 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 ZNF189O75820 626 aaPredicted RBP24.95■■□□□ 1.58
FANCA-228ENST00000567943 HLA-DPA1P20036 260 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 EIF2S3P41091 472 aaKnown RBP24.95■■□□□ 1.58
FANCA-228ENST00000567943 LSSP48449 732 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 MAZP56270 477 aaKnown RBP24.95■■□□□ 1.58
FANCA-228ENST00000567943 GABREP78334 506 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 ILF3Q12906 894 aaKnown RBP eCLIP24.95■■□□□ 1.581e-7■■■■■ 41
FANCA-228ENST00000567943 SPIDRQ14159 915 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 PRPSAP1Q14558 356 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 TBC1D25Q3MII6 688 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 B3GNT8Q7Z7M8 397 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 OR6C4Q8NGE1 309 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 SNIP1Q8TAD8 396 aaKnown RBP24.95■■□□□ 1.58
FANCA-228ENST00000567943 WDR48Q8TAF3 677 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 SLC35B2Q8TB61 432 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 HNRNPLLQ8WVV9 542 aaKnown RBP24.95■■□□□ 1.58
FANCA-228ENST00000567943 PRR11Q96HE9 360 aaPredicted RBP24.95■■□□□ 1.58
FANCA-228ENST00000567943 FICDQ9BVA6 458 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 RAD18Q9NS91 495 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 SATB2Q9UPW6 733 aa24.95■■□□□ 1.58
FANCA-228ENST00000567943 DXOO77932 396 aaKnown RBP24.94■■□□□ 1.58
FANCA-228ENST00000567943 ASMTLO95671 621 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 AGTP01019 485 aa24.94■■□□□ 1.58
FANCA-228ENST00000567943 RPLP0P05388 317 aaKnown RBP24.94■■□□□ 1.58
FANCA-228ENST00000567943 COL28A1Q2UY09 1125 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms