RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CASC3O15234 703 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 INPP4BO15327 924 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CST8O60676 142 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ZRANB2O95218 330 aaKnown RBP eCLIP4.75□□□□□ -1.65
CLK3-219ENST00000567805 NDUFA10O95299 355 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 IPO7O95373 1038 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 ASMTLO95671 621 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ECEL1O95672 775 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CPNE6O95741 557 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 NDST3O95803 873 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 MT-CYBP00156 380 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 ITGA2BP08514 1039 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 GPR89BP0CG08 455 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PTPN3P26045 913 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 AK4P27144 223 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 ITPKBP27987 946 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ACTR1BP42025 376 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TNNT3P45378 269 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 GPR3P46089 330 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 FASLGP48023 281 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ZNF75DP51815 510 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 UCNP55089 124 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 INHBCP55103 352 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 MAZP56270 477 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 TMPRSS3P57727 454 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 DCDC1P59894 354 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ACTR1AP61163 376 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 COPS2P61201 443 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 DYNLT1P63172 113 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 B4GALNT1Q00973 533 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CTBSQ01459 385 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TLE3Q04726 772 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CDK18Q07002 472 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ZFP36L1Q07352 338 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 CCDC173Q0VFZ6 552 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 BIRC2Q13490 618 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 GALNT3Q14435 633 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PPP2R5EQ16537 467 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PCSK7Q16549 785 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CLPPQ16740 277 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 MAP9Q49MG5 647 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PYCR3Q53H96 274 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 KAZNQ674X7 775 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PDPK2PQ6A1A2 396 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 FOXR1Q6PIV2 292 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 DOK6Q6PKX4 331 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 SLC30A9Q6PML9 568 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 SPOCD1Q6ZMY3 1216 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 RAB11FIP2Q7L804 512 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 LYSMD3Q7Z3D4 306 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TMC3Q7Z5M5 1100 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 B3GNT8Q7Z7M8 397 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CLEC14AQ86T13 490 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 DAAM2Q86T65 1068 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TRIM74Q86UV6 250 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PIM3Q86V86 326 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 GALNT13Q8IUC8 556 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TMTC1Q8IUR5 882 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CCDC50Q8IVM0 306 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 SFTPA2Q8IWL1 248 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 SPACA3Q8IXA5 215 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 RCOR2Q8IZ40 523 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 FBXO39Q8N4B4 442 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 Q8N9G6 341 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 SPATA22Q8NHS9 363 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 KCNE4Q8WWG9 221 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 P3H4Q92791 437 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TMEM159Q96B96 161 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 CRELD1Q96HD1 420 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 RBM41Q96IZ5 413 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 TEKT5Q96M29 485 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 FCRL3Q96P31 734 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 OR2M4Q96R27 311 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TRIB3Q96RU7 358 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 WDR24Q96S15 920 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 AGAP2Q99490 1192 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 VAT1Q99536 393 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ZSCAN5AQ9BUG6 496 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 RIOK2Q9BVS4 552 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 CEP41Q9BYV8 373 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 FOXP3Q9BZS1 431 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PRORYQ9H606 182 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 SUDS3Q9H7L9 328 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 RMI1Q9H9A7 625 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ZFYVE1Q9HBF4 777 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 GLOD4Q9HC38 313 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 MAGEE1Q9HCI5 957 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 EPB41L5Q9HCM4 733 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 NFKBIL1Q9UBC1 381 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 SAE1Q9UBE0 346 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 CNOT6Q9ULM6 557 aaKnown RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 EFR3BQ9Y2G0 817 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 TMEM98Q9Y2Y6 226 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 ST14Q9Y5Y6 855 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 EPN1Q9Y6I3 576 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 TEX51A0A1B0GUA7 166 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 LOC285095A0A1B0GVY8 99 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms