RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SDCCAG8Q86SQ7 713 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 RPAP2Q8IXW5 612 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 C1orf87Q8N0U7 546 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 LILRB1Q8NHL6 650 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 DUSP19Q8WTR2 217 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 TANKQ92844 425 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 ORAI1Q96D31 301 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 HARBI1Q96MB7 349 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 NSMCE4AQ9NXX6 385 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 SMARCAL1Q9NZC9 954 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 OR14J1Q9UGF5 321 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 ZNF215Q9UL58 517 aaPredicted RBP4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 R3HDM2Q9Y2K5 976 aaKnown RBP4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 NFS1Q9Y697 457 aa4.75□□□□□ -1.65
SHCBP1-206ENST00000567698 PDS5AQ29RF7 1337 aaKnown RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 KAT6BQ8WYB5 2073 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 A0A1W2PP11 408 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 hCG_1807616A0A1W2PRN6 198 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 LACTBL1A8MY62 500 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 TPPPO94811 219 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CLTBP09497 229 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CSH1P0DML2 217 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CSH2P0DML3 217 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 SELLP14151 372 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 ANXA7P20073 488 aaKnown RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 UGT1A1P22309 533 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 PON1P27169 355 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CORO1AP31146 461 aaKnown RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CCKARP32238 428 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 GPR143P51810 404 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CLNS1AP54105 237 aaKnown RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CLDN20P56880 219 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 TAS2R38P59533 333 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 SREBF2Q12772 1141 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 ILF3Q12906 894 aaKnown RBP eCLIP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CUL4AQ13619 759 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 PLEKHS1Q5SXH7 462 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 C9orf57Q5W0N0 161 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 PAPD4Q6PIY7 484 aaKnown RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 PRSS57Q6UWY2 283 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 HACE1Q8IYU2 909 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 OR8K5Q8NH50 307 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 C3orf30Q96M34 536 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 TIGD1Q96MW7 591 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 GAD1Q99259 594 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 GFI1Q99684 422 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 CMKLR1Q99788 373 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 TMEM30AQ9NV96 361 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 ZNF224Q9NZL3 707 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 UBA2Q9UBT2 640 aaPredicted RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 SIX4Q9UIU6 781 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 NENFQ9UMX5 172 aa4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 TMEM184BQ9Y519 407 aaPredicted RBP4.74□□□□□ -1.65
SHCBP1-206ENST00000567698 A0A1W2PQ09 198 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 SMAD9O15198 467 aaKnown RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 OGG1O15527 345 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 SPINT2O43291 252 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 HS6ST1O60243 411 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 LDHCP07864 332 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 SRPRAP08240 638 aaKnown RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 HLA-DOBP13765 273 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 PRCPP42785 496 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 TFAP4Q01664 338 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 SLC20A2Q08357 652 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 IKQ13123 557 aaPredicted RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 CALCRLQ16602 461 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 RAB6CQ53S08 254 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 DCST1Q5T197 706 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 WDR78Q5VTH9 848 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 C18orf63Q68DL7 685 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 GFRALQ6UXV0 394 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 IL17RCQ8NAC3 791 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 OR1J2Q8NGS2 313 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 HM13Q8TCT9 377 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 ABTB1Q969K4 478 aaPredicted RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 LRRC59Q96AG4 307 aaKnown RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 MED30Q96HR3 178 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 RAB6CQ9H0N0 254 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 DDX31Q9H8H2 851 aaKnown RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 EPB41L5Q9HCM4 733 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 SELENONQ9NZV5 590 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 FBXO2Q9UK22 296 aaPredicted RBP4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 CMAHPQ9Y471 501 aa4.73□□□□□ -1.65
SHCBP1-206ENST00000567698 KANSL1LA0AUZ9 987 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 OR2A25A4D2G3 310 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 C4orf47A7E2U8 309 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 H3BQ06 376 aaPredicted RBP4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 K7ENM7 598 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 MAP2K7O14733 419 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 PLPP2O43688 288 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 PAPSS2O95340 614 aaPredicted RBP4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 RRM1P23921 792 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 ACTN2P35609 894 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 MMP14P50281 582 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 SUOXP51687 545 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 FOXM1Q08050 763 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 EPS8Q12929 822 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 CDC16Q13042 620 aa4.72□□□□□ -1.65
SHCBP1-206ENST00000567698 SF3B4Q15427 424 aaKnown RBP eCLIP4.72□□□□□ -1.658e-7■■■■□ 25.3
SHCBP1-206ENST00000567698 MYLK3Q32MK0 819 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms