RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 FAF2Q96CS3 445 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 COX14Q96I36 57 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 NUDT22Q9BRQ3 303 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 SARS2Q9NP81 518 aaKnown RBP18.47■□□□□ 0.55
LINC01238-205ENST00000567549 TMEM98Q9Y2Y6 226 aa18.47■□□□□ 0.55
LINC01238-205ENST00000567549 KIR2DS5A0A0G2JLQ3 304 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 A0A0G2JNG1 304 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 B4E171 279 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 ANKRD66B4E2M5 251 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 C9orf172C9J069 976 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 KIR2DS3K7RE56 304 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 SOD1P00441 154 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 FUCA1P04066 466 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 GYPCP04921 128 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 CD48P09326 243 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 THRAP10827 490 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 TSPAN7P41732 249 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 ARHGAP25P42331 645 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 KIR2DS5Q14953 304 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 PDK1Q15118 436 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 TGIF1Q15583 401 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 PDPK2PQ6A1A2 396 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 WDR74Q6RFH5 385 aaPredicted RBP18.46■□□□□ 0.55
LINC01238-205ENST00000567549 ZFAND4Q86XD8 727 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC01238-205ENST00000567549 IL22RA1Q8N6P7 574 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 XPO4Q9C0E2 1151 aaKnown RBP18.46■□□□□ 0.55
LINC01238-205ENST00000567549 CARD9Q9H257 536 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 GRPEL1Q9HAV7 217 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 IFNKQ9P0W0 207 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 PCDHGA4Q9Y5G9 962 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 ATMQ13315 3056 aa18.46■□□□□ 0.55
LINC01238-205ENST00000567549 SSU72P8A0A1W2PR75 194 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 PPM1DO15297 605 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 INPP4BO15327 924 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 AKR1B10O60218 316 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 MTA2O94776 668 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 CLDN7O95471 211 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 TMEM253P0C7T8 217 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 CASP14P31944 242 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 ETV5P41161 510 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 SPINT3P49223 89 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 IFI35P80217 286 aaPredicted RBP18.45■□□□□ 0.54
LINC01238-205ENST00000567549 PPIDQ08752 370 aaKnown RBP18.45■□□□□ 0.54
LINC01238-205ENST00000567549 ZNF569Q5MCW4 686 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 CHST15Q7LFX5 561 aaPredicted RBP18.45■□□□□ 0.54
LINC01238-205ENST00000567549 LYSMD3Q7Z3D4 306 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 TMPRSS9Q7Z410 1059 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 FAM129CQ86XR2 697 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 SFTPA2Q8IWL1 248 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 RHOT2Q8IXI1 618 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 RCBTB1Q8NDN9 531 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 OR8K1Q8NGG5 319 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 ARRDC2Q8TBH0 407 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 SLC37A2Q8TED4 501 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 KIAA1143Q96AT1 154 aaPredicted RBP18.45■□□□□ 0.54
LINC01238-205ENST00000567549 ZSCAN5AQ9BUG6 496 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 ZFYVE1Q9HBF4 777 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 SLC39A1Q9NY26 324 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 FOXJ2Q9P0K8 574 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 ZNF462Q96JM2 2506 aa18.45■□□□□ 0.54
LINC01238-205ENST00000567549 LRRD1A4D1F6 860 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 APOL1O14791 398 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 SLC28A2O43868 658 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 HLA-DQB2P05538 268 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 KDELR1P24390 212 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 CD86P42081 329 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 SLC14A2Q15849 920 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 HENMT1Q5T8I9 393 aaKnown RBP18.44■□□□□ 0.54
LINC01238-205ENST00000567549 CEACAM20Q6UY09 585 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 PATE1Q8WXA2 126 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 ART4Q93070 314 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 CATSPER2Q96P56 530 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 RNF157Q96PX1 679 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 TRIT1Q9H3H1 467 aaKnown RBP18.44■□□□□ 0.54
LINC01238-205ENST00000567549 DTLQ9NZJ0 730 aa18.44■□□□□ 0.54
LINC01238-205ENST00000567549 AGRPO00253 132 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 PPFIA2O75334 1257 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 MAP3K6O95382 1288 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 JCHAINP01591 159 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 CCL4P13236 92 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 F3P13726 295 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 VCLP18206 1134 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 DCDC1P59894 354 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 AP1B1Q10567 949 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.43■□□□□ 0.54
LINC01238-205ENST00000567549 CYB5D1Q6P9G0 228 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 ZNF574Q6ZN55 896 aaPredicted RBP18.43■□□□□ 0.54
LINC01238-205ENST00000567549 TRIM74Q86UV6 250 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 NT5DC3Q86UY8 548 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 PLXDC1Q8IUK5 500 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 SPATA16Q9BXB7 569 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 ADNPQ9H2P0 1102 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 MAGEE1Q9HCI5 957 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 DDX56Q9NY93 547 aaKnown RBP18.43■□□□□ 0.54
LINC01238-205ENST00000567549 PDP2Q9P2J9 529 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 HEY1Q9Y5J3 304 aa18.43■□□□□ 0.54
LINC01238-205ENST00000567549 GRID2O43424 1007 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 DNAJC6O75061 913 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 SLC25A14O95258 325 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms