RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 RAD9BQ6WBX8 426 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 DPPA4Q7L190 304 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 GPR180Q86V85 440 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 SRBD1Q8N5C6 995 aaKnown RBP3.88□□□□□ -1.79
NAE1-216ENST00000566663 APBB2Q92870 758 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 RNF125Q96EQ8 232 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 LINGO1Q96FE5 620 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 ZNF354BQ96LW1 612 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 SCLT1Q96NL6 688 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 ACOX2Q99424 681 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 PCGF1Q9BSM1 259 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 TFB2MQ9H5Q4 396 aaKnown RBP3.88□□□□□ -1.79
NAE1-216ENST00000566663 LTB4R2Q9NPC1 389 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 FBXL2Q9UKC9 423 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 ACSL5Q9ULC5 683 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 KLHL20Q9Y2M5 609 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 MMP24Q9Y5R2 645 aa3.88□□□□□ -1.79
NAE1-216ENST00000566663 PCDH7O60245 1069 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 PRKNO60260 465 aaPredicted RBP3.87□□□□□ -1.79
NAE1-216ENST00000566663 F9P00740 461 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 HOXC9P31274 260 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 UBA7P41226 1012 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 PAFAH1B1P43034 410 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 AMPHP49418 695 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 CLDN20P56880 219 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 GRIK2Q13002 908 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 MYLK3Q32MK0 819 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 FAM69AQ5T7M9 428 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 C18orf63Q68DL7 685 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 CCDC13Q8IYE1 715 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 ZNF485Q8NCK3 441 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 TM9SF4Q92544 642 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 HTRA1Q92743 480 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 UPF2Q9HAU5 1272 aaKnown RBP3.87□□□□□ -1.79
NAE1-216ENST00000566663 ZNF624Q9P2J8 865 aaPredicted RBP3.87□□□□□ -1.79
NAE1-216ENST00000566663 HAO1Q9UJM8 370 aa3.87□□□□□ -1.79
NAE1-216ENST00000566663 A0A1B0GU03 582 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 RRN3P2A6NIE6 340 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 HS3ST1O14792 307 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 EIF3DO15371 548 aaKnown RBP eCLIP3.86□□□□□ -1.79
NAE1-216ENST00000566663 ZNF23P17027 643 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 APOBEC1P41238 236 aaKnown RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 ARCN1P48444 511 aaKnown RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 CTCFP49711 727 aaPredicted RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 TAF6P49848 677 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 PLIN5Q00G26 463 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 SLC9C2Q5TAH2 1124 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 SFMBT2Q5VUG0 894 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 ATF7IPQ6VMQ6 1270 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 MAP7D3Q8IWC1 876 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 NFKBIDQ8NI38 313 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 GTF3C6Q969F1 213 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 IGSF8Q969P0 613 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 SAAL1Q96ER3 474 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 MOV10L1Q9BXT6 1211 aaKnown RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 SLC25A18Q9H1K4 315 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 PRKRIP1Q9H875 184 aaPredicted RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 KIF9Q9HAQ2 790 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 MAP3K20Q9NYL2 800 aaKnown RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 RRN3Q9NYV6 651 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 ABI3Q9P2A4 366 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 INTS6Q9UL03 887 aaKnown RBP3.86□□□□□ -1.79
NAE1-216ENST00000566663 CYP46A1Q9Y6A2 500 aa3.86□□□□□ -1.79
NAE1-216ENST00000566663 FAM237AA0A1B0GTK4 181 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 SMIM1B2RUZ4 78 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 FAM90A26D6RGX4 464 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 NCAM2O15394 837 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 CTSVO60911 334 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 TBX6O95947 436 aaPredicted RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 ABCD3P28288 659 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 AHRP35869 848 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 PIP4K2AP48426 406 aaPredicted RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 EIF3BP55884 814 aaKnown RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 MAD2L1Q13257 205 aaPredicted RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 KRT71Q3SY84 523 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 CXorf66Q5JRM2 361 aaPredicted RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 WDR38Q5JTN6 314 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 STPG4Q8N801 248 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 SLC44A1Q8WWI5 657 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 PSPC1Q8WXF1 523 aaKnown RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 RRNAD1Q96FB5 475 aaKnown RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 STAMBPL1Q96FJ0 436 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 HARBI1Q96MB7 349 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 NR1H4Q96RI1 486 aaPredicted RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 FSD1Q9BTV5 496 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 USP44Q9H0E7 712 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 MARCH4Q9P2E8 410 aaPredicted RBP3.85□□□□□ -1.79
NAE1-216ENST00000566663 CAPN7Q9Y6W3 813 aa3.85□□□□□ -1.79
NAE1-216ENST00000566663 IGKV3D-15A0A087WSY6 115 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 OR5K3A6NET4 321 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 ERI2A8K979 691 aaKnown RBP3.84□□□□□ -1.79
NAE1-216ENST00000566663 M0QZ24 198 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 ANKRD28O15084 1053 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 KCNN4O15554 427 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 ZNF182P17025 639 aaPredicted RBP3.84□□□□□ -1.79
NAE1-216ENST00000566663 UGT1A1P22309 533 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 UBA1P22314 1058 aaKnown RBP3.84□□□□□ -1.79
NAE1-216ENST00000566663 COG7P83436 770 aa3.84□□□□□ -1.79
NAE1-216ENST00000566663 TBX2Q13207 712 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms